| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 87-149 | 63 | 150-352 | 1-39 | 40-86 | 39 | 202 | slipknot |
Chain Sequence |
HVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGKSYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 58-150 | 93 | 151-352 | 1-40 | 41-57 | 40 | 201 | slipknot | ||
| view details |
|
2.1 | 83-153 | 71 | 154-352 | 1-70 | 71-82 | 70 | 198 | slipknot | ||
| view details |
 |
3.1 | 86-255 | 170 | 1-82, 269-352 | 83-85, 256-268 | 82 | 84 | slipknot | |||
| view details |
|
3.1 | 86-268 | 183 | 1-82, 276-352 | 83-85, 269-275 | 82 | 77 | slipknot | |||
| view details |
|
3.1 | 87-259 | 173 | 1-85, 276-352 | 86-86, 260-275 | 85 | 77 | slipknot | |||
| view details |
|
3.1 | 87-340 | 254 | 341-352 | 1-82 | 83-86 | 82 | 11 | slipknot | ||
| view details |
|
3.1 | 90-180 | 91 | 181-352 | 1-82 | 83-89 | 82 | 171 | slipknot |
| sequence length |
352
|
| structure length |
352
|
| publication title |
Contribution of intertwined loop to membrane association revealed by Zika virus full-length NS1 structure
pubmed doi rcsb |
| molecule tags |
Viral protein
|
| molecule keywords |
NS1 of Zika virus from 2015 Brazil strain
|
| source organism |
Zika virus
|
| total genus |
 Genus: 86
|
| ec nomenclature | |
| pdb deposition date | 2016-08-14 |
| KnotProt deposition date | 2017-01-05 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
