5IF3A

Crystal structure of a short-chain dehydrogenase/reductase sdr from burkholderia vietnamiensis
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Genus: 77
Knot K +31

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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 140-192 53 1-139, 193-247 139 55 knot
Chain Sequence
CAPRVRAIVTGHTRGLGASLAEQLLQQDIAVLGVSRSRHPSLAATAGDRLVETELDLSDTAAVAAWLAGGALRSFVDGASLVLLFNNAGVVDPIGPLAAQDPALVARAVALNVAAPLMLSAALVQAAAAPTECRVLHVSSGAARNAYAGWSVYCATKAALDHHARAVALDANRALRICSVAPGVV-------------------------------STPDEAARHLIRYALSDAFGAEPTADVRNLP
Whole chain analysis

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Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1


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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1 139-185 47 1-138, 186-216 138 31 knot
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling