| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 153-197 | 45 | 1-152, 198-225 | 152 | 28 | knot |
Chain Sequence |
PPVLTSKDKITKRMIVVLAMASLETHKI---------YVLLNCDDHQGLLDISEARPDI-----THQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAPVIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWNIL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 138-185 | 48 | 1-137, 186-211 | 137 | 26 | knot | ||||
| view details |
 |
2.1 | 62-182 | 121 | 1-19, 186-211 | 20-61, 183-185 | 19 | 26 | slipknot |
| sequence length |
225
|
| structure length |
211
|
| publication title |
Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
pubmed doi rcsb |
| molecule tags |
Ribosome
|
| molecule keywords |
WD40 domain proteins
|
| missing residues |
29-37, 51-55
|
| total genus |
 Genus: 42
|
| ec nomenclature | |
| pdb deposition date | 2016-05-04 |
| KnotProt deposition date | 2016-07-29 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
