5KELA

Ebov gp in complex with variable fab domains of iggs c2g4 and c13c6
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 76-139 64 1-75 143-276 140-142 75 134 slipknot
Chain Sequence
IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILP---------------------PSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNRKIRSEELSF
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
1.1 81-138 58 1-74, 144-235 75-80, 139-143 74 92 slipknot
sequence length 276
structure length 235
publication title Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.
pubmed doi rcsb
molecule tags Viral protein/immune system
molecule keywords Ebola surface glycoprotein, GP1
source organism Zaire ebolavirus (strain mayinga-76)
missing residues 156-176, 247-266
total genus Genus: 59
ec nomenclature
pdb deposition date 2016-06-09
KnotProt deposition date 2016-09-07
Image from the rcsb pdb (www.rcsb.org)
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