| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 196-237 | 42 | 1-195, 238-269 | 195 | 32 | knot |
Chain Sequence |
GQVKEVTSLTNPIVKDIRALTQKKHRDETRSFMAEGLKLVIDALDLGWKIKTLVY-------PQVEQVAAKTVARGGLVLEVNEKVISTITRRDNPQMVVGIFEQRYSPLRDIHPQEGETYVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIARANTEDFIRWQRAAGVQVVATHLAGSVDYRTIDYKSKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEARRHLLSL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 188-231 | 44 | 1-187, 232-262 | 187 | 31 | knot | ||||
| view details |
 |
2.1 | 187-227 | 41 | 1-186 | 234-262 | 228-233 | 186 | 29 | slipknot | ||
| view details |
|
3.1 | 190-241 | 52 | 1-187, 259-262 | 188-189, 242-258 | 187 | 4 | slipknot | |||
| view details |
|
3.1 | 190-258 | 69 | 259-262 | 1-187 | 188-189 | 187 | 3 | slipknot | ||
| view details |
|
2.1 | 191-243 | 53 | 1-189, 259-262 | 190-190, 244-258 | 189 | 4 | slipknot |
| sequence length |
269
|
| structure length |
262
|
| publication title |
Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
rcsb |
| molecule tags |
Rna binding protein
|
| molecule keywords |
Probable RNA methyltransferase, TrmH family
|
| source organism |
Rhizobium meliloti (strain 1021)
|
| missing residues |
56-62
|
| total genus |
 Genus: 77
|
| ec nomenclature | |
| pdb deposition date | 2016-07-25 |
| KnotProt deposition date | 2017-08-28 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
