| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 75-254 | 180 | 255-482 | 1-55 | 56-74 | 55 | 227 | slipknot | ||
| view details |
 |
41 | 50-287 | 238 | 1-49 | 340-482 | 288-339 | 49 | 143 | slipknot |
Chain Sequence |
DFGFINYAVLFGYLAAMLLVGVYFSKRQKTADDYFRGGGRVPGWAAGVSVFATTLSSITFMSIPAKAYTSDWTFIIGQYLAIAILPLVFYFYIPFFRKLKITSAYEYLEARFDVRSRLFASLSFMLFHIGRVAIITYLTVLALRPFMGIDPVVLIVLISLLCIIYTWMGGIEGVIWTDVIQGLLLSGGAVLIFIMICFKVDGGISEIFTTTAQADKFFPTTQWRWSWTDSTIPVLMIGFLFANIQQFTASQDVVQRYIVTDSIKETKRTLITNAKLVAIIPIFFFAIGSALFVYYQQNPSLLPAGFNTGGILPLFIVTEMPIGIAGLIIAAIFAAAQSSISSSLNSISSCFNSDIYTRLSKSSPSPEQKMKVAKLVIIVAGIFSSLAAIWLVLS----------SLIGLMGGPMTGLFMLGIFVKRANAGSAVVGIIVSIIAVLAARYGSDLNFFFYGVIGSMSVVIAGTITAPLFAPAKQL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 49-282 | 234 | 1-48 | 295-472 | 283-294 | 48 | 178 | slipknot | ||
| view details |
 |
4.1 | 36-310 | 275 | 1-35 | 332-472 | 311-331 | 35 | 141 | slipknot | ||
| view details |
|
3.2 | 50-322 | 273 | 1-10, 337-472 | 11-49, 323-336 | 10 | 136 | slipknot | |||
| view details |
|
3.2 | 50-336 | 287 | 1-10, 340-472 | 11-49, 337-339 | 10 | 133 | slipknot | |||
| view details |
|
4.1 | 41-294 | 254 | 1-23, 309-472 | 24-40, 295-308 | 23 | 164 | slipknot | |||
| view details |
|
4.1 | 45-294 | 250 | 1-40, 307-472 | 41-44, 295-306 | 40 | 166 | slipknot | |||
| view details |
|
4.1 | 45-320 | 276 | 1-35, 323-472 | 36-44, 321-322 | 35 | 150 | slipknot | |||
| view details |
|
3.2 | 54-307 | 254 | 1-41, 319-472 | 42-53, 308-318 | 41 | 154 | slipknot | |||
| view details |
|
3.2 | 54-318 | 265 | 1-41, 321-472 | 42-53, 319-320 | 41 | 152 | slipknot | |||
| view details |
|
3.2 | 54-297 | 244 | 1-44, 305-472 | 45-53, 298-304 | 44 | 168 | slipknot | |||
| view details |
|
3.2 | 53-304 | 252 | 1-44, 306-472 | 45-52, 305-305 | 44 | 167 | slipknot | |||
| view details |
 |
3.2m | 54-305 | 252 | 1-43, 308-472 | 44-53, 306-307 | 43 | 165 | slipknot | |||
| view details |
 |
2.1 | 79-340 | 262 | 1-50, 401-472 | 51-78, 341-400 | 50 | 72 | slipknot | |||
| view details |
|
|
2.1 | 77-400 | 324 | 1-54, 402-472 | 55-76, 401-401 | 54 | 71 | slipknot | ||
| view details |
|
|
2.1 | 81-401 | 321 | 402-472 | 1-52 | 53-80 | 52 | 70 | slipknot | |
| view details |
 |
1.1 | 67-280 | 214 | 1-57, 288-472 | 58-66, 281-287 | 57 | 185 | slipknot | |||
| view details |
|
1.1 | 80-272 | 193 | 1-64, 293-472 | 65-79, 273-292 | 64 | 180 | slipknot | |||
| view details |
|
1.1 | 82-272 | 191 | 1-79, 293-472 | 80-81, 273-292 | 79 | 180 | slipknot | |||
| view details |
|
1.1 | 79-269 | 191 | 1-70, 273-472 | 71-78, 270-272 | 70 | 200 | slipknot |
| sequence length |
482
|
| structure length |
472
|
| publication title |
Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site
rcsb |
| molecule tags |
Membrane protein
|
| molecule keywords |
Putative sodium:solute symporter
|
| source organism |
Proteus mirabilis (strain hi4320)
|
| missing residues |
395-404
|
| total genus |
 Genus: 214
|
| ec nomenclature | |
| pdb deposition date | 2017-05-03 |
| KnotProt deposition date | 2018-04-04 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
