| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 170-214 | 45 | 1-169, 215-242 | 169 | 28 | knot |
Chain Sequence |
VRTIRIYQPGEYQPGQLLELSPEAGQHVGVVLRMEQGEQLTLFNGDNKEFTASIERVKKKQVFVRIASVLEVNRESPLKIHLAQAISKGERMEMVMQKSAELGVACITPLITERCQVKIDKEKMAKKMHQWLNIIIGACEQCGRNQIPELRQPVYLDQFVREAKEHLKLILHPAFSKTWRDYPVQPPDVALIIGPEGGFSDEEIRLTSGHGFLPLSLGPRVLRTETAAITALSVLQAAGGDL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 167-226 | 60 | 1-166, 227-242 | 166 | 16 | knot | ||||
| view details |
|
3.1 | 167-214 | 48 | 1-166 | 227-242 | 215-226 | 166 | 16 | slipknot | ||
| view details |
|
3.1 | 168-216 | 49 | 1-166, 227-242 | 167-167, 217-226 | 166 | 16 | slipknot | |||
| view details |
|
3.1 | 168-228 | 61 | 1-166, 242-242 | 167-167, 229-241 | 166 | 1 | slipknot | |||
| view details |
|
3.1 | 169-216 | 48 | 1-167, 241-242 | 168-168, 217-240 | 167 | 2 | slipknot |
| sequence length |
242
|
| structure length |
242
|
| publication title |
Crystal structure of the Legionella pneumophila Lpg2936 in complex with the cofactor S-adenosyl-L-methionine reveals novel insights into the mechanism of RsmE family methyltransferases.
pubmed doi rcsb |
| molecule tags |
Transferase
|
| molecule keywords |
Ribosomal RNA small subunit methyltransferase E
|
| source organism |
Legionella pneumophila
|
| total genus |
 Genus: 81
|
| ec nomenclature | |
| pdb deposition date | 2017-06-15 |
| KnotProt deposition date | 2017-11-08 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
