5O95A

Structure of the putative methyltransferase lpg2936 from legionella pneumophila
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 170-214 45 1-169, 215-242 169 28 knot
Chain Sequence
VRTIRIYQPGEYQPGQLLELSPEAGQHVGVVLRMEQGEQLTLFNGDNKEFTASIERVKKKQVFVRIASVLEVNRESPLKIHLAQAISKGERMEMVMQKSAELGVACITPLITERCQVKIDKEKMAKKMHQWLNIIIGACEQCGRNQIPELRQPVYLDQFVREAKEHLKLILHPAFSKTWRDYPVQPPDVALIIGPEGGFSDEEIRLTSGHGFLPLSLGPRVLRTETAAITALSVLQAAGGDL
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1 167-226 60 1-166, 227-242 166 16 knot
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3.1 167-214 48 1-166 227-242 215-226 166 16 slipknot
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3.1 168-216 49 1-166, 227-242 167-167, 217-226 166 16 slipknot
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3.1 168-228 61 1-166, 242-242 167-167, 229-241 166 1 slipknot
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3.1 169-216 48 1-167, 241-242 168-168, 217-240 167 2 slipknot
publication title Crystal structure of the Legionella pneumophila Lpg2936 in complex with the cofactor S-adenosyl-L-methionine reveals novel insights into the mechanism of RsmE family methyltransferases.
pubmed doi rcsb
structure length 242
molecule tags Transferase
source organism Legionella pneumophila
sequence length 242
total genus Genus: 81
molecule keywords Ribosomal RNA small subunit methyltransferase E
ec nomenclature
pdb deposition date 2017-06-15
KnotProt deposition date 2017-11-08
Image from the rcsb pdb (www.rcsb.org)
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