5O96A

Structure of the putative methyltransferase lpg2936 from legionella pneumophila in complex with the bound cofactor sam
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 171-214 44 1-170, 215-242 170 28 knot
Chain Sequence
VRTIRIYQPGEYQPGQLLELSPEAGQHVGVVLRMEQGEQLTLFNGDNKEFTASIERVKKKQVFVRIASVLEVNRESPLKIHLAQAISKGERMEMVMQKSAELGVACITPLITERCQVKIDKEKMAKKMHQWLNIIIGACEQCGRNQIPELRQPVYLDQFVREAKEHLKLILHPAFSKTWRDYPVQPPDVALIIGPEGGFSDEEIRLTSGHGFLPLSLGPRVLRTETAAITALSVLQAAGGDL
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 168-215 48 1-167, 216-242 167 27 knot
view details
3.1 169-215 47 1-167, 241-242 168-168, 216-240 167 2 slipknot
publication title Crystal structure of the Legionella pneumophila Lpg2936 in complex with the cofactor S-adenosyl-L-methionine reveals novel insights into the mechanism of RsmE family methyltransferases.
pubmed doi rcsb
structure length 242
molecule tags Transferase
source organism Legionella pneumophila
sequence length 242
total genus Genus: 74
molecule keywords Ribosomal RNA small subunit methyltransferase E
ec nomenclature
pdb deposition date 2017-06-15
KnotProt deposition date 2017-11-08
Image from the rcsb pdb (www.rcsb.org)
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