5O9Zy

Cryo-em structure of a pre-catalytic human spliceosome primed for activation (b complex)
Knot K -31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
-31 14-63 50 1-13, 64-90 13 27 knot
Chain Sequence
DLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1m 14-80 67 1-13, 81-89 13 9 knot
view details
3.1m 13-65 53 1-12 81-89 66-80 12 9 slipknot
publication title Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation.
pubmed doi rcsb
structure length 89
molecule tags Splicing
sequence length 89
molecule keywords Pre-mRNA-processing-splicing factor 8
ec nomenclature
pdb deposition date 2017-06-20
KnotProt deposition date 2018-09-16
Image from the rcsb pdb (www.rcsb.org)
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