| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
-31 | 193-255 | 63 | 1-192, 256-390 | 192 | 135 | knot |
Chain Sequence |
VARYPPIVASMTADSKAARLRRIERWQATVHAAESVDEKLRILTKMQFMKYMVYPQTFALNADRWYQYFTKTVFLSGLP--------------------AALRAVACDCLLQEHFYLRRRRRVHRYEESEVISLPFLDQLVSTLVGLLSPHNPALAAAALDYRCPVHFYWVRGEEIIPRGHRRGRIDDLRYQIDDKPNNQIRISKQLAEFVPLDYSVPIEIPTIKCKPDKLPLFKRQYENHIFVGSKTADPCCYGHTQFHLLPDKLRRERLLRQNCADQIEVVFRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTTQADQNNPRKNICWGTQSKPLYETIEDNDVKGFNDDVLLQIVHFLLNRPK
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
|
 |
2.1m | 52-358 | 307 | 1-51, 359-370 | 51 | 12 | knot | |||
| view details |
 |
3.1m | 167-238 | 72 | 1-150, 263-370 | 151-166, 239-262 | 150 | 108 | slipknot | |||
| view details |
|
3.1m | 169-238 | 70 | 1-166, 263-370 | 167-168, 239-262 | 166 | 108 | slipknot | |||
| view details |
|
3.1m | 169-262 | 94 | 1-151, 265-370 | 152-168, 263-264 | 151 | 106 | slipknot | |||
| view details |
|
2.1m | 169-264 | 96 | 1-151, 280-370 | 152-168, 265-279 | 151 | 91 | slipknot | |||
| view details |
|
3.1m | 170-334 | 165 | 335-370 | 1-151 | 152-169 | 151 | 35 | slipknot | ||
| view details |
|
2.1m | 171-263 | 93 | 1-168, 277-370 | 169-170, 264-276 | 168 | 94 | slipknot | |||
| view details |
|
3.1m | 169-297 | 129 | 1-152, 311-370 | 153-168, 298-310 | 152 | 60 | slipknot | |||
| view details |
|
3.1m | 171-334 | 164 | 335-370 | 1-169 | 170-170 | 169 | 35 | slipknot |
| sequence length |
390
|
| structure length |
370
|
| publication title |
Structures of the human mitochondrial ribosome in native states of assembly
doi rcsb |
| molecule tags |
Ribosome
|
| molecule keywords |
16S ribosomal RNA
|
| missing residues |
80-99
|
| total genus |
 Genus: 20
|
| ec nomenclature | |
| pdb deposition date | 2017-08-08 |
| KnotProt deposition date | 2017-09-13 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
