| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 156-201 | 46 | 1-155, 202-229 | 155 | 28 | knot |
Chain Sequence |
HVPIPPNDKDTKRLIVVLSNASLETYK--------------YTLLNSDEHIGIMRKMNRDISDARPDITHQCLLTLLDSPINKAGKLQIYIQTAKGVLIEVSPTVRIPRTFKRFAGLMVQLLHRLSIKGTNTNEKLLKVIQNPITDHLPPNCRKVTLSFDAPLVRVRDYVDTLGPNESICVFVGAMAKGPDNFADAYVDEKISISNYSLSASVACSKFCHACEDAWDII
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 142-189 | 48 | 1-141, 190-215 | 141 | 26 | knot | ||||
| view details |
 |
2.1 | 140-185 | 46 | 1-139 | 191-215 | 186-190 | 139 | 25 | slipknot |
| sequence length |
229
|
| structure length |
215
|
| publication title |
3.2- Angstrom -resolution structure of the 90S preribosome before A1 pre-rRNA cleavage.
pubmed doi rcsb |
| molecule tags |
Ribosome
|
| molecule keywords |
Periodic tryptophan protein 2-like protein
|
| missing residues |
28-41
|
| total genus |
 Genus: 45
|
| ec nomenclature | |
| pdb deposition date | 2017-08-12 |
| KnotProt deposition date | 2017-10-11 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
