| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 9-217 | 209 | 1-8 | 336-388 | 218-335 | 8 | 53 | slipknot |
Chain Sequence |
QNKLLLVSFDGFRWNYDQDVDTPNLDAMARDGVKARYMTPAFVTMTSPCHFTLVTGKYIENHGVVHNMYYNTTSKVKLPYHATLGIQRWWDNGSVPIWITAQRQGLRAGSFFYPGGNVTYQGVAVTRSRKEGIAHNYKNETEWRANIDTVMAWFTEEDLDLVTLYFGEPDSTGHRYGPESPERREMVRQVDRTVGYLRESIARNHLTDRLNLIITSDHGMTTVDKRAGDLVEFHKFPNFTFRDIEFELLDYGPNGMLLPKEGRLEKVYDALKDAHPKLHVYKKEAFPEAFHYANNPRVTPLLMYSDLGYVIHGRINVQFNNGEHGFDNKDMDMKTIFRAVGPSFRAGLEVEPFESVHVYELMCRLLGIVPEANDGHLATLLPMLHTES
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 6-217 | 212 | 1-5 | 224-388 | 218-223 | 5 | 165 | slipknot | ||
| view details |
|
2.1 | 8-219 | 212 | 1-7 | 328-388 | 220-327 | 7 | 61 | slipknot | ||
| view details |
 |
3.1 | 6-328 | 323 | 1-5 | 334-388 | 329-333 | 5 | 55 | slipknot | ||
| view details |
|
2.1 | 9-283 | 275 | 1-7, 293-388 | 8-8, 284-292 | 7 | 96 | slipknot | |||
| view details |
|
2.1 | 10-263 | 254 | 1-7, 272-388 | 8-9, 264-271 | 7 | 117 | slipknot |
| sequence length |
388
|
| structure length |
388
|
| publication title |
Crystal Structure of the Human Alkaline Sphingomyelinase Provides Insights into Substrate Recognition.
pubmed doi rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
Ectonucleotide pyrophosphatase/phosphodiesterase family memb
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 133
|
| ec nomenclature | |
| pdb deposition date | 2016-09-14 |
| KnotProt deposition date | 2017-03-26 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
