5VM8A

Crystal structure of a ribosomal rna small subunit methyltransferase e from neisseria gonorrhoeae bound to s-adenosyl methionine
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 169-212 44 1-168, 213-242 168 30 knot
Chain Sequence
HMPRFYLPENLSVGQTVDLPDNIVRHLNVLRVRPNENITLFDGKGKAHTARLTVLEKHRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVTAIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKMPSENTKLIMSINRACKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKRILRTETAPLAAIAAMQTLWGDFT
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 167-214 48 1-166, 215-242 166 28 knot
view details
3.1 168-215 48 1-166, 236-242 167-167, 216-235 166 7 slipknot
publication title Crystal structure of a Ribosomal RNA small subunit methyltransferase E from Neisseria gonorrhoeae bound to S-adenosyl methionine
rcsb
structure length 242
molecule tags Transferase
source organism Neisseria gonorrhoeae
sequence length 242
total genus Genus: 73
molecule keywords Ribosomal RNA small subunit methyltransferase E
ec nomenclature
pdb deposition date 2017-04-26
KnotProt deposition date 2018-09-13
Image from the rcsb pdb (www.rcsb.org)
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