| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 152-197 | 46 | 1-151, 198-225 | 151 | 28 | knot |
Chain Sequence |
PPVLTSKDKITKRMIVVLAMASLETHKI--------KYVLLNCDDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAPVIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWNIL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 141-205 | 65 | 1-140, 206-217 | 140 | 12 | knot | ||||
| view details |
|
3.1 | 141-190 | 50 | 1-140 | 196-217 | 191-195 | 140 | 22 | slipknot | ||
| view details |
|
3.1 | 141-195 | 55 | 1-140 | 206-217 | 196-205 | 140 | 12 | slipknot | ||
| view details |
|
3.1 | 142-195 | 54 | 1-140, 206-217 | 141-141, 196-205 | 140 | 12 | slipknot | |||
| view details |
|
3.1 | 142-205 | 64 | 206-217 | 1-140 | 141-141 | 140 | 11 | slipknot |
| sequence length |
225
|
| structure length |
217
|
| publication title |
Molecular architecture of the 90S small subunit pre-ribosome.
pubmed doi rcsb |
| molecule tags |
Ribosome
|
| molecule keywords |
U3 RNA
|
| missing residues |
29-36
|
| total genus |
 Genus: 56
|
| ec nomenclature | |
| pdb deposition date | 2017-01-13 |
| KnotProt deposition date | 2017-04-07 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
