5ZWM5

Cryo-em structure of the yeast pre-b complex at an average resolution of 3.4~4.6 angstrom (tri-snrnp and u2 snrnp part)
Knot K -31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
-31 19-69 51 1-18, 70-103 18 34 knot
Chain Sequence
SRHQFDLIMCLKQPGVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGVNDAFYCWECCRLGKDKDGCPRILNLGSNRLDRHFEKK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1m 19-72 54 1-18, 73-103 18 31 knot
sequence length 103
structure length 103
publication title Structures of the fully assembledSaccharomyces cerevisiaespliceosome before activation
pubmed doi rcsb
molecule tags Splicing
molecule keywords Pre-mRNA-splicing factor 8
total genus Genus: 14
ec nomenclature
pdb deposition date 2018-05-16
KnotProt deposition date 2018-09-14
Image from the rcsb pdb (www.rcsb.org)
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