| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 42-276 | 235 | 277-544 | 1-24 | 25-41 | 24 | 267 | slipknot | ||
| view details |
 |
41 | 22-305 | 284 | 1-21 | 365-544 | 306-364 | 21 | 180 | slipknot |
Chain Sequence |
GSQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICAQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIALSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSSFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIIASFLMSPPQLRLFQYNYPYWSIILGYAIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPETP
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 16-302 | 287 | 1-15 | 313-544 | 303-312 | 15 | 232 | slipknot | ||
| view details |
 |
4.1 | 15-313 | 299 | 1-14 | 351-544 | 314-350 | 14 | 194 | slipknot | ||
| view details |
|
3.2 | 13-350 | 338 | 1-12 | 365-544 | 351-364 | 12 | 180 | slipknot | ||
| view details |
|
3.2 | 16-348 | 333 | 1-12, 356-544 | 13-15, 349-355 | 12 | 189 | slipknot | |||
| view details |
|
3.2 | 16-355 | 340 | 1-12, 365-544 | 13-15, 356-364 | 12 | 180 | slipknot | |||
| view details |
|
4.1 | 22-343 | 322 | 1-14, 362-544 | 15-21, 344-361 | 14 | 183 | slipknot | |||
| view details |
|
4.1 | 21-361 | 341 | 1-15, 364-544 | 16-20, 362-363 | 15 | 181 | slipknot | |||
| view details |
 |
3.2m | 23-343 | 321 | 1-21, 362-544 | 22-22, 344-361 | 21 | 183 | slipknot | |||
| view details |
|
3.2m | 19-339 | 321 | 1-14, 344-544 | 15-18, 340-343 | 14 | 201 | slipknot | |||
| view details |
 |
2.1 | 46-369 | 324 | 1-21, 407-544 | 22-45, 370-406 | 21 | 138 | slipknot | |||
| view details |
|
2.1 | 46-432 | 387 | 433-544 | 1-21 | 22-45 | 21 | 111 | slipknot | ||
| view details |
|
2.1 | 34-275 | 242 | 1-22, 289-544 | 23-33, 276-288 | 22 | 256 | slipknot | |||
| view details |
 |
1.1 | 40-258 | 219 | 1-26, 272-544 | 27-39, 259-271 | 26 | 273 | slipknot | |||
| view details |
|
1.1 | 46-293 | 248 | 1-30, 306-544 | 31-45, 294-305 | 30 | 239 | slipknot | |||
| view details |
|
2.1 | 44-417 | 374 | 1-37, 430-544 | 38-43, 418-429 | 37 | 115 | slipknot |
| sequence length |
544
|
| structure length |
544
|
| publication title |
Structural basis for recognition of diverse antidepressants by the human serotonin transporter
rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Sodium-dependent serotonin transporter
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 183
|
| ec nomenclature | |
| pdb deposition date | 2017-09-06 |
| KnotProt deposition date | 2017-10-25 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
