| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 42-276 | 235 | 277-544 | 1-24 | 25-41 | 24 | 267 | slipknot | ||
| view details |
 |
41 | 19-305 | 287 | 1-18 | 367-544 | 306-366 | 18 | 178 | slipknot |
Chain Sequence |
GSQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICAQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIALSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSSFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIIASFLMSPPQLRLFQYNYPYWSIILGYAIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPETP
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 16-301 | 286 | 1-15 | 312-544 | 302-311 | 15 | 233 | slipknot | ||
| view details |
 |
4.1 | 15-313 | 299 | 1-14 | 337-544 | 314-336 | 14 | 208 | slipknot | ||
| view details |
|
4.1 | 12-341 | 330 | 1-11 | 352-544 | 342-351 | 11 | 193 | slipknot | ||
| view details |
|
3.2 | 14-347 | 334 | 1-13 | 365-544 | 348-364 | 13 | 180 | slipknot | ||
| view details |
|
3.2 | 19-341 | 323 | 1-11, 362-544 | 12-18, 342-361 | 11 | 183 | slipknot | |||
| view details |
|
3.2 | 19-361 | 343 | 1-13, 365-544 | 14-18, 362-364 | 13 | 180 | slipknot | |||
| view details |
|
3.2 | 17-335 | 319 | 1-11, 342-544 | 12-16, 336-341 | 11 | 203 | slipknot | |||
| view details |
 |
2.1 | 43-272 | 230 | 1-19, 290-544 | 20-42, 273-289 | 19 | 255 | slipknot | |||
| view details |
|
2.1 | 43-370 | 328 | 1-21, 407-544 | 22-42, 371-406 | 21 | 138 | slipknot | |||
| view details |
|
2.1 | 46-424 | 379 | 1-22, 509-544 | 23-45, 425-508 | 22 | 36 | slipknot | |||
| view details |
 |
1.1 | 37-293 | 257 | 1-27, 309-544 | 28-36, 294-308 | 27 | 236 | slipknot | |||
| view details |
|
1.1 | 40-258 | 219 | 1-28, 273-544 | 29-39, 259-272 | 28 | 272 | slipknot | |||
| view details |
|
1.1 | 42-258 | 217 | 1-39, 273-544 | 40-41, 259-272 | 39 | 272 | slipknot | |||
| view details |
|
1.1 | 45-293 | 249 | 1-36, 309-544 | 37-44, 294-308 | 36 | 236 | slipknot | |||
| view details |
|
2.1 | 43-289 | 247 | 1-31, 294-544 | 32-42, 290-293 | 31 | 251 | slipknot | |||
| view details |
|
1.1 | 43-259 | 217 | 1-41, 267-544 | 42-42, 260-266 | 41 | 278 | slipknot | |||
| view details |
|
2.1 | 44-286 | 243 | 1-42, 293-544 | 43-43, 287-292 | 42 | 252 | slipknot |
| sequence length |
544
|
| structure length |
544
|
| publication title |
Structural basis for recognition of diverse antidepressants by the human serotonin transporter
rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Sodium-dependent serotonin transporter
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 184
|
| ec nomenclature | |
| pdb deposition date | 2017-09-06 |
| KnotProt deposition date | 2017-10-25 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
