| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 42-276 | 235 | 277-544 | 1-24 | 25-41 | 24 | 267 | slipknot | ||
| view details |
 |
41 | 19-305 | 287 | 1-18 | 367-544 | 306-366 | 18 | 178 | slipknot |
Chain Sequence |
GSQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICAQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIALSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSSFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIIASFLMSPPQLRLFQYNYPYWSIILGYAIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPETP
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 15-301 | 287 | 1-14 | 314-544 | 302-313 | 14 | 231 | slipknot | ||
| view details |
 |
4.1 | 16-313 | 298 | 1-15 | 329-544 | 314-328 | 15 | 216 | slipknot | ||
| view details |
|
4.1 | 16-328 | 313 | 1-15 | 339-544 | 329-338 | 15 | 206 | slipknot | ||
| view details |
|
4.1 | 10-338 | 329 | 1-9 | 353-544 | 339-352 | 9 | 192 | slipknot | ||
| view details |
|
4.1 | 16-348 | 333 | 1-15 | 362-544 | 349-361 | 15 | 183 | slipknot | ||
| view details |
|
4.1 | 16-361 | 346 | 1-15 | 365-544 | 362-364 | 15 | 180 | slipknot | ||
| view details |
|
3.2 | 18-348 | 331 | 1-15, 362-544 | 16-17, 349-361 | 15 | 183 | slipknot | |||
| view details |
|
3.2 | 24-338 | 315 | 1-16, 349-544 | 17-23, 339-348 | 16 | 196 | slipknot | |||
| view details |
|
3.2 | 23-335 | 313 | 1-17, 339-544 | 18-22, 336-338 | 17 | 206 | slipknot | |||
| view details |
 |
1.1 | 26-287 | 262 | 1-20, 297-544 | 21-25, 288-296 | 20 | 248 | slipknot | |||
| view details |
 |
2.1 | 43-369 | 327 | 1-20, 410-544 | 21-42, 370-409 | 20 | 135 | slipknot | |||
| view details |
|
2.1 | 46-483 | 438 | 484-544 | 1-21 | 22-45 | 21 | 60 | slipknot | ||
| view details |
|
2.1 | 43-272 | 230 | 1-27, 288-544 | 28-42, 273-287 | 27 | 257 | slipknot | |||
| view details |
|
1.1 | 42-258 | 217 | 1-28, 268-544 | 29-41, 259-267 | 28 | 277 | slipknot | |||
| view details |
|
1.1 | 45-290 | 246 | 1-31, 308-544 | 32-44, 291-307 | 31 | 237 | slipknot | |||
| view details |
|
1.1 | 39-267 | 229 | 1-32, 273-544 | 33-38, 268-272 | 32 | 272 | slipknot | |||
| view details |
|
2.1 | 42-414 | 373 | 1-36, 421-544 | 37-41, 415-420 | 36 | 124 | slipknot |
| sequence length |
544
|
| structure length |
544
|
| publication title |
Structural basis for recognition of diverse antidepressants by the human serotonin transporter
rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Sodium-dependent serotonin transporter
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 183
|
| ec nomenclature | |
| pdb deposition date | 2017-09-06 |
| KnotProt deposition date | 2017-10-25 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
