6BAKA

The structure of the stigmatella aurantiaca phytochrome chromophore binding domain t289h mutant
Knot K 41 41
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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41 12-261 250 1-11, 262-303 11 42 knot
Chain Sequence
TNCDREPIHIPGAIQPHGVLLVLSEPGLVLTHASENAPAVLGNSAEQLLGAPLGHFIEPSVREPLEADLRSARLKQLNPLKVVWRVDGVDRFFDGIAHRHQGRLILELEPSSHREAVPFLSFFHAVRDGLSRLRDARDLQELCEAVVQEVRGLTGFDRAIIYRFDAEWNGSVIAEARDARADPYLGLHFPASDIPRQARELYQLNWLRIIPTIDYQPARVRALPGHGEPLDLSFSVLRSVSPIHLEYLHNMGVQASMSISLMKDGKLWGLISCHQVSGTRYVPYEVRTACEFLGEVMSSLLAA
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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4.1 11-299 289 1-10, 300-303 10 4 knot
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4.1 12-258 247 1-11 274-303 259-273 11 30 slipknot
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3.2m 12-279 268 1-11 300-303 280-299 11 4 slipknot
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3.2 14-261 248 1-11, 269-303 12-13, 262-268 11 35 slipknot
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3.2m 15-294 280 295-303 1-10 11-14 10 8 slipknot
publication title Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome
doi rcsb
structure length 303
molecule tags Signaling protein
source organism Stigmatella aurantiaca dw4/3-1
sequence length 303
total genus Genus: 92
molecule keywords Photoreceptor-histidine kinase BphP
ec nomenclature
pdb deposition date 2017-10-13
KnotProt deposition date 2018-09-25
Image from the rcsb pdb (www.rcsb.org)
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