6BAOA

Stigmatella aurantiaca phytochrome photosensory core module, wild type
Knot K 41 41
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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41 19-263 245 1-18, 264-503 18 240 knot
Chain Sequence
QEVDLTNCDREPIHIPGAIQPHGVLLVLSEPGLVLTHASENAPAVLGNSAEQLLGAPLGHFIEPSVREPLEADLRSARLKQLNPLKVVWRVDGVDRFFDGIAHRHQGRLILELEPSSHREAVPFLSFFHAVRDGLSRLRDARDLQELCEAVVQEVRGLTGFDRAIIYRFDAEWNGSVIAEARDARADPYLGLHFPASDIPRQARELYQLNWLRIIPTIDYQPARVRALPGHGEPLDLSFSVLRSVSPIHLEYLHNMGVQASMSISLMKDGKLWGLISCTQVSGTRYVPYEVRTACEFLGEVMSSLLAAKEGNEDYDQRIRAKSIHAALLERMAREVDFVSGLASQESGLLELVHAHGAAIHFHGRTTVLGQAPSDEALTGLIEWLGSRTGEGVFCTDRLAREYPEAQAFQEVAAGLMAFSMSRGRNNFVLWFRPEAVQTVNWSGNPTKAVEFDQGGPRLHPRKSFELWKETVRGRCLPWKAYEVEAASELRRSIIDVALQRSE
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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4.1 17-302 286 1-16, 303-503 16 201 knot
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3.2m 17-258 242 1-16 267-503 259-266 16 237 slipknot
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4.1 15-266 252 1-14 274-503 267-273 14 230 slipknot
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3.2m 18-271 254 1-17 279-503 272-278 17 225 slipknot
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3.2m 17-278 262 1-16 282-503 279-281 16 222 slipknot
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3.2m 17-281 265 1-16 303-503 282-302 16 201 slipknot
publication title Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome
doi rcsb
structure length 503
molecule tags Signaling protein
source organism Stigmatella aurantiaca dw4/3-1
sequence length 503
total genus Genus: 133
molecule keywords Photoreceptor-histidine kinase BphP
ec nomenclature
pdb deposition date 2017-10-14
KnotProt deposition date 2018-09-25
Image from the rcsb pdb (www.rcsb.org)
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