| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 52-313 | 262 | 1-51 | 373-408 | 314-372 | 51 | 36 | slipknot |
Chain Sequence |
EYPVLQKILIGLILGAIVGLILGHYGYADAVKTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPKQAPPLVKILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVKVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKKAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLESVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 43-294 | 252 | 1-42 | 321-408 | 295-320 | 42 | 88 | slipknot | ||
| view details |
|
2.1 | 38-332 | 295 | 1-37 | 346-408 | 333-345 | 37 | 63 | slipknot | ||
| view details |
 |
3.1 | 41-354 | 314 | 1-40 | 374-408 | 355-373 | 40 | 35 | slipknot | ||
| view details |
|
3.1 | 15-320 | 306 | 1-2, 333-408 | 3-14, 321-332 | 2 | 76 | slipknot | |||
| view details |
|
2.1 | 24-320 | 297 | 1-14, 333-408 | 15-23, 321-332 | 14 | 76 | slipknot | |||
| view details |
|
3.1 | 39-320 | 282 | 1-23, 333-408 | 24-38, 321-332 | 23 | 76 | slipknot | |||
| view details |
|
3.1 | 39-333 | 295 | 1-37, 336-408 | 38-38, 334-335 | 37 | 73 | slipknot | |||
| view details |
|
3.1 | 42-320 | 279 | 1-38, 334-408 | 39-41, 321-333 | 38 | 75 | slipknot | |||
| view details |
|
3.1 | 42-333 | 292 | 1-38, 336-408 | 39-41, 334-335 | 38 | 73 | slipknot | |||
| view details |
|
2.1 | 62-320 | 259 | 1-41, 340-408 | 42-61, 321-339 | 41 | 69 | slipknot |
| sequence length |
408
|
| structure length |
408
|
| publication title |
Structural characterisation reveals insights into substrate recognition by the glutamine transporter ASCT2/SLC1A5.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Glutamate transporter homolog
|
| source organism |
Pyrococcus horikoshii
|
| total genus |
 Genus: 156
|
| ec nomenclature | |
| pdb deposition date | 2017-10-15 |
| KnotProt deposition date | 2018-01-17 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
