6DZMA

Bundibugyo virus gp (mucin-deleted) in complex with pan-ebolavirus human antibody adi-15878 fab
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 68-139 72 1-1, 143-260 2-67, 140-142 1 118 slipknot
Chain Sequence
IPLGVVHNNTLQVSDIDKLVCRDKLSSTSQLKSVGLNLEGNGVATDVPTATKRWGFRAGVPPKVVNYEAGEWAENCYNLDIKKADGSECLPEAPEGVRGFPRCRYVHKVSGTGPCPEGYAFHKEGAFFLYDRLASTIIYRSTTFSEGVVAFLILPETKKDF---------------------TVTLNYVADNFGTNMTNFLFQVDHLTYVQLEPRFTPQFLVQLNETIYTNGRLIWKVNPWAFWE
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 76-137 62 1-75 145-260 138-144 75 116 slipknot
view details
1.1 80-138 59 1-75, 144-260 76-79, 139-143 75 117 slipknot
sequence length 260
structure length 224
publication title Structural basis of pan-ebolavirus neutralization by an antibody targeting the glycoprotein fusion loop
rcsb
molecule tags Viral protein
molecule keywords Bundibugyo virus GP1
source organism Bundibugyo ebolavirus
missing residues 162-182, 234-240, 248-255
total genus Genus: 35
ec nomenclature
pdb deposition date 2018-07-05
KnotProt deposition date 2018-09-15
Image from the rcsb pdb (www.rcsb.org)
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