| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 37-273 | 237 | 274-537 | 1-20 | 21-36 | 20 | 263 | slipknot | ||
| view details |
 |
41 | 13-300 | 288 | 1-12 | 353-537 | 301-352 | 12 | 185 | slipknot |
Chain Sequence |
RETWGKKVDFLLSVIGYAVDLGNVWRFPYICAQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIALSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIIASFLMSPPQLRLFQYNYPYWSIILGYAIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 10-296 | 287 | 1-9 | 308-537 | 297-307 | 9 | 230 | slipknot | ||
| view details |
 |
4.1 | 11-306 | 296 | 1-10 | 343-537 | 307-342 | 10 | 195 | slipknot | ||
| view details |
|
3.2 | 18-341 | 324 | 1-17 | 357-537 | 342-356 | 17 | 181 | slipknot | ||
| view details |
 |
2.1 | 33-264 | 232 | 1-16, 283-537 | 17-32, 265-282 | 16 | 255 | slipknot | |||
| view details |
|
2.1 | 33-282 | 250 | 1-16, 286-537 | 17-32, 283-285 | 16 | 252 | slipknot | |||
| view details |
|
2.1 | 42-364 | 323 | 1-16, 402-537 | 17-41, 365-401 | 16 | 136 | slipknot | |||
| view details |
|
2.1 | 42-418 | 377 | 419-537 | 1-16 | 17-41 | 16 | 118 | slipknot | ||
| view details |
 |
1.1 | 41-282 | 242 | 1-21, 303-537 | 22-40, 283-302 | 21 | 235 | slipknot | |||
| view details |
|
1.1 | 41-302 | 262 | 1-22, 304-537 | 23-40, 303-303 | 22 | 234 | slipknot | |||
| view details |
|
1.1 | 37-253 | 217 | 1-23, 267-537 | 24-36, 254-266 | 23 | 271 | slipknot | |||
| view details |
|
1.1 | 37-266 | 230 | 1-32, 270-537 | 33-36, 267-269 | 32 | 268 | slipknot | |||
| view details |
|
1.1 | 38-253 | 216 | 1-36, 266-537 | 37-37, 254-265 | 36 | 272 | slipknot | |||
| view details |
|
1.1 | 38-266 | 229 | 1-36, 270-537 | 37-37, 267-269 | 36 | 268 | slipknot |
| sequence length |
537
|
| structure length |
537
|
| publication title |
Cryo-EM structure of human serotonin transporter in complex with ibogaine
rcsb |
| molecule tags |
Transport protein/immune system
|
| molecule keywords |
Sodium-dependent serotonin transporter
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 110
|
| ec nomenclature | |
| pdb deposition date | 2018-07-05 |
| KnotProt deposition date | 2019-05-07 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
