6F1TN

Cryo-em structure of two dynein tail domains bound to dynactin and bicdr1
Slipknot S -52 -31 -31 -31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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-31 602-286 -315 1-601, 287-818 601 531 slipknot
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51 134-425 292 1-133 651-818 426-650 133 168 slipknot
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82 139-656 518 1-27, 776-818 28-138, 657-775 27 43 slipknot
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-52 53-685 633 1-52 769-818 686-768 52 50 slipknot
Chain Sequence
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Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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2.1m 46-270 225 1-45 351-616 271-350 45 266 slipknot
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3.1m 46-350 305 1-45 353-616 351-352 45 264 slipknot
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4.3 46-352 307 1-45 384-616 353-383 45 233 slipknot
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4.3 46-383 338 1-45 391-616 384-390 45 226 slipknot
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5.1m 40-390 351 1-39 416-616 391-415 39 201 slipknot
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5.1m 40-415 376 1-39 421-616 416-420 39 196 slipknot
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5.1m 40-420 381 1-39 426-616 421-425 39 191 slipknot
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5.1m 40-425 386 1-39 427-616 426-426 39 190 slipknot
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5.2m 49-530 482 1-48 590-616 531-589 48 27 slipknot
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2.1m 68-271 204 1-45, 350-616 46-67, 272-349 45 267 slipknot
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1.1m 68-251 184 1-35, 272-616 36-67, 252-271 35 345 slipknot
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3.14m 70-342 273 1-39, 394-616 40-69, 343-393 39 223 slipknot
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2.1m 70-273 204 1-67, 339-616 68-69, 274-338 67 278 slipknot
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1.1m 69-258 190 1-67, 271-616 68-68, 259-270 67 346 slipknot
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3.14m 71-349 279 1-69, 394-616 70-70, 350-393 69 223 slipknot
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4.3 74-374 301 1-45, 422-616 46-73, 375-421 45 195 slipknot
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4.3 74-421 348 1-45, 426-616 46-73, 422-425 45 191 slipknot
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4.3 74-425 352 1-45, 429-616 46-73, 426-428 45 188 slipknot
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3.14m 73-343 271 1-70, 375-616 71-72, 344-374 70 242 slipknot
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3.1m 100-379 280 1-73, 424-616 74-99, 380-423 73 193 slipknot
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3.1m 100-423 324 1-73, 425-616 74-99, 424-424 73 192 slipknot
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3.1m 100-424 325 1-73, 428-616 74-99, 425-427 73 189 slipknot
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3.1m 100-427 328 1-68, 431-616 69-99, 428-430 68 186 slipknot
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3.1m 100-430 331 1-77, 432-616 78-99, 431-431 77 185 slipknot
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3.1m 100-431 332 1-77, 434-616 78-99, 432-433 77 183 slipknot
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3.1m 100-433 334 1-79, 435-616 80-99, 434-434 79 182 slipknot
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3.1m 97-434 338 1-79, 436-616 80-96, 435-435 79 181 slipknot
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3.1m 100-434 335 1-96, 436-616 97-99, 435-435 96 181 slipknot
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3.1m 106-379 274 1-99, 424-616 100-105, 380-423 99 193 slipknot
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3.1m 106-423 318 1-99, 425-616 100-105, 424-424 99 192 slipknot
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3.1m 106-424 319 1-99, 428-616 100-105, 425-427 99 189 slipknot
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3.1m 106-427 322 1-99, 431-616 100-105, 428-430 99 186 slipknot
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3.1m 106-430 325 1-99, 432-616 100-105, 431-431 99 185 slipknot
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3.1m 106-431 326 1-99, 434-616 100-105, 432-433 99 183 slipknot
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3.1m 106-433 328 1-99, 435-616 100-105, 434-434 99 182 slipknot
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3.1m 106-434 329 1-99, 436-616 100-105, 435-435 99 181 slipknot
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3.1m 106-435 330 1-78, 438-616 79-105, 436-437 78 179 slipknot
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3.1m 107-379 273 1-105, 424-616 106-106, 380-423 105 193 slipknot
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3.1m 107-424 318 1-105, 428-616 106-106, 425-427 105 189 slipknot
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3.1m 107-427 321 1-105, 431-616 106-106, 428-430 105 186 slipknot
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3.1m 107-431 325 1-105, 434-616 106-106, 432-433 105 183 slipknot
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3.1m 107-435 329 1-105, 438-616 106-106, 436-437 105 179 slipknot
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5.1m 104-471 368 1-83, 499-616 84-103, 472-498 83 118 slipknot
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5.1m 104-498 395 1-84, 500-616 85-103, 499-499 84 117 slipknot
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5.1m 104-499 396 1-83, 501-616 84-103, 500-500 83 116 slipknot
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4.3 148-494 347 1-102, 530-616 103-147, 495-529 102 87 slipknot
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4.3 152-450 299 1-105, 529-616 106-151, 451-528 105 88 slipknot
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3.14m 145-433 289 1-106, 451-616 107-144, 434-450 106 166 slipknot
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4.3 156-450 295 1-151, 529-616 152-155, 451-528 151 88 slipknot
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1.1m 149-353 205 1-107, 392-616 108-148, 354-391 107 225 slipknot
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1.1m 152-350 199 1-112, 391-616 113-151, 351-390 112 226 slipknot
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1.1m 152-391 240 1-109, 394-616 110-151, 392-393 109 223 slipknot
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3.14m 148-433 286 1-144, 451-616 145-147, 434-450 144 166 slipknot
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3.14m 152-434 283 1-147, 451-616 148-151, 435-450 147 166 slipknot
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3.14m 156-433 278 1-147, 451-616 148-155, 434-450 147 166 slipknot
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3.14m 159-433 275 1-155, 465-616 156-158, 434-464 155 152 slipknot
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3.14m 159-464 306 1-155, 473-616 156-158, 465-472 155 144 slipknot
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3.14m 159-472 314 1-155, 476-616 156-158, 473-475 155 141 slipknot
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3.14m 159-475 317 1-155, 479-616 156-158, 476-478 155 138 slipknot
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3.14m 160-434 275 1-158, 473-616 159-159, 435-472 158 144 slipknot
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3.14m 160-472 313 1-158, 476-616 159-159, 473-475 158 141 slipknot
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3.14m 160-475 316 1-158, 479-616 159-159, 476-478 158 138 slipknot
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4.3 172-467 296 1-155, 525-616 156-171, 468-524 155 92 slipknot
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2.1m 239-434 196 1-159, 476-616 160-238, 435-475 159 141 slipknot
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2.1m 239-475 237 1-171, 482-616 172-238, 476-481 171 135 slipknot
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3.1m 172-530 359 1-152, 604-616 153-171, 531-603 152 13 slipknot
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2.1m 249-434 186 1-238, 476-616 239-248, 435-475 238 141 slipknot
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2.1m 249-475 227 1-238, 478-616 239-248, 476-477 238 139 slipknot
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2.1m 249-477 229 1-238, 479-616 239-248, 478-478 238 138 slipknot
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2.1m 249-478 230 1-238, 482-616 239-248, 479-481 238 135 slipknot
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2.1m 249-481 233 1-171, 486-616 172-248, 482-485 171 131 slipknot
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3.1m 249-485 237 1-171, 524-616 172-248, 486-523 171 93 slipknot
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2.1m 252-433 182 1-164, 472-616 165-251, 434-471 164 145 slipknot
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2.1m 252-471 220 1-248, 476-616 249-251, 472-475 248 141 slipknot
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2.1m 252-475 224 1-248, 477-616 249-251, 476-476 248 140 slipknot
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2.1m 252-476 225 1-248, 478-616 249-251, 477-477 248 139 slipknot
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2.1m 252-477 226 1-248, 479-616 249-251, 478-478 248 138 slipknot
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2.1m 252-478 227 1-248, 482-616 249-251, 479-481 248 135 slipknot
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2.1m 252-481 230 1-248, 485-616 249-251, 482-484 248 132 slipknot
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2.1m 252-484 233 1-248, 486-616 249-251, 485-485 248 131 slipknot
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3.1m 252-485 234 1-248, 524-616 249-251, 486-523 248 93 slipknot
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3.1m 243-540 298 541-616 1-172 173-242 172 75 slipknot
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3.1m 244-540 297 541-616 1-242 243-243 242 75 slipknot
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3.1m 232-530 299 1-179, 541-616 180-231, 531-540 179 76 slipknot
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3.1m 236-530 295 1-231, 541-616 232-235, 531-540 231 76 slipknot
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1.1m 256-435 180 1-251, 469-616 252-255, 436-468 251 148 slipknot
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2.1m 256-468 213 1-251, 472-616 252-255, 469-471 251 145 slipknot
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1.1m 258-437 180 1-255, 469-616 256-257, 438-468 255 148 slipknot
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2.1m 258-468 211 1-255, 472-616 256-257, 469-471 255 145 slipknot
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1.1m 260-441 182 1-257, 469-616 258-259, 442-468 257 148 slipknot
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1.1m 259-468 210 1-257, 472-616 258-258, 469-471 257 145 slipknot
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1.1m 259-471 213 1-251, 473-616 252-258, 472-472 251 144 slipknot
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1.1m 263-518 256 1-241, 531-616 242-262, 519-530 241 86 slipknot
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1.1m 262-444 183 1-259, 469-616 260-261, 445-468 259 148 slipknot
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1.1m 262-468 207 1-259, 472-616 260-261, 469-471 259 145 slipknot

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling