6F3AN

Cryo-em structure of a single dynein tail domain bound to dynactin and bicd2n
Slipknot S -52 -31 -31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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-31 608-284 -323 1-607, 285-818 607 533 slipknot
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51 131-429 299 1-130 651-818 430-650 130 168 slipknot
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82 139-656 518 1-21, 784-818 22-138, 657-783 21 35 slipknot
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-52 49-688 640 1-48 780-818 689-779 48 39 slipknot
Chain Sequence
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Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1m 46-271 226 1-45 354-616 272-353 45 263 slipknot
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4.3 47-348 302 1-46 387-616 349-386 46 230 slipknot
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4.3 47-386 340 1-46 388-616 387-387 46 229 slipknot
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4.3 47-387 341 1-46 391-616 388-390 46 226 slipknot
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5.1m 40-390 351 1-39 416-616 391-415 39 201 slipknot
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5.1m 40-415 376 1-39 421-616 416-420 39 196 slipknot
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5.1m 40-420 381 1-39 424-616 421-423 39 193 slipknot
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5.1m 40-423 384 1-39 427-616 424-426 39 190 slipknot
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5.2m 49-530 482 1-48 593-616 531-592 48 24 slipknot
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3.1m 68-269 202 1-31, 343-616 32-67, 270-342 31 274 slipknot
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2.1m 68-342 275 1-45, 344-616 46-67, 343-343 45 273 slipknot
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3.1m 68-343 276 1-45, 346-616 46-67, 344-345 45 271 slipknot
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3.1m 68-345 278 1-45, 350-616 46-67, 346-349 45 267 slipknot
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2.1m 69-272 204 1-67, 339-616 68-68, 273-338 67 278 slipknot
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2.1m 70-269 200 1-68, 339-616 69-69, 270-338 68 278 slipknot
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2.1m 70-346 277 1-68, 350-616 69-69, 347-349 68 267 slipknot
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3.14m 72-349 278 1-39, 394-616 40-71, 350-393 39 223 slipknot
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1.1m 70-251 182 1-38, 270-616 39-69, 252-269 38 347 slipknot
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2.1m 71-282 212 1-69, 321-616 70-70, 283-320 69 296 slipknot
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3.14m 73-349 277 1-71, 394-616 72-72, 350-393 71 223 slipknot
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3.1m 97-382 286 1-67, 428-616 68-96, 383-427 67 189 slipknot
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3.1m 97-427 331 1-68, 432-616 69-96, 428-431 68 185 slipknot
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3.1m 97-431 335 1-77, 435-616 78-96, 432-434 77 182 slipknot
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3.1m 101-382 282 1-96, 428-616 97-100, 383-427 96 189 slipknot
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3.1m 101-427 327 1-96, 432-616 97-100, 428-431 96 185 slipknot
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3.1m 101-431 331 1-96, 435-616 97-100, 432-434 96 182 slipknot
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3.1m 104-379 276 1-72, 423-616 73-103, 380-422 72 194 slipknot
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3.1m 104-422 319 1-100, 428-616 101-103, 423-427 100 189 slipknot
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3.1m 104-427 324 1-100, 431-616 101-103, 428-430 100 186 slipknot
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3.1m 104-430 327 1-100, 432-616 101-103, 431-431 100 185 slipknot
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3.1m 104-431 328 1-100, 434-616 101-103, 432-433 100 183 slipknot
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3.1m 104-433 330 1-100, 435-616 101-103, 434-434 100 182 slipknot
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3.1m 107-379 273 1-103, 423-616 104-106, 380-422 103 194 slipknot
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3.1m 107-422 316 1-103, 428-616 104-106, 423-427 103 189 slipknot
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3.1m 107-427 321 1-103, 431-616 104-106, 428-430 103 186 slipknot
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3.1m 107-430 324 1-103, 432-616 104-106, 431-431 103 185 slipknot
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3.1m 107-431 325 1-103, 434-616 104-106, 432-433 103 183 slipknot
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3.1m 107-433 327 1-103, 435-616 104-106, 434-434 103 182 slipknot
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3.1m 110-382 273 1-106, 428-616 107-109, 383-427 106 189 slipknot
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2.1m 108-349 242 1-79, 383-616 80-107, 350-382 79 234 slipknot
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2.1m 110-353 244 1-107, 383-616 108-109, 354-382 107 234 slipknot
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5.1m 106-473 368 1-83, 503-616 84-105, 474-502 83 114 slipknot
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5.1m 106-502 397 1-83, 518-616 84-105, 503-517 83 99 slipknot
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1.1m 148-359 212 1-109, 411-616 110-147, 360-410 109 206 slipknot
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2.1m 148-410 263 1-98, 446-616 99-147, 411-445 98 171 slipknot
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4.3 153-452 300 1-101, 530-616 102-152, 453-529 101 87 slipknot
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3.14m 138-445 308 1-102, 453-616 103-137, 446-452 102 164 slipknot
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3.14m 148-445 298 1-137, 453-616 138-147, 446-452 137 164 slipknot
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4.3 152-449 298 1-147, 453-616 148-151, 450-452 147 164 slipknot
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3.14m 155-449 295 1-151, 493-616 152-154, 450-492 151 124 slipknot
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4.3 155-492 338 1-152, 530-616 153-154, 493-529 152 87 slipknot
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2.1m 152-390 239 1-147, 432-616 148-151, 391-431 147 185 slipknot
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2.1m 152-431 280 1-147, 435-616 148-151, 432-434 147 182 slipknot
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2.1m 152-434 283 1-147, 438-616 148-151, 435-437 147 179 slipknot
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2.1m 152-437 286 1-147, 445-616 148-151, 438-444 147 172 slipknot
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2.1m 152-444 293 1-147, 446-616 148-151, 445-445 147 171 slipknot
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2.1m 152-445 294 1-147, 448-616 148-151, 446-447 147 169 slipknot
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2.1m 152-447 296 1-147, 449-616 148-151, 448-448 147 168 slipknot
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2.1m 152-448 297 1-147, 450-616 148-151, 449-449 147 167 slipknot
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1.1m 149-352 204 1-109, 375-616 110-148, 353-374 109 242 slipknot
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1.1m 149-385 237 1-147, 390-616 148-148, 386-389 147 227 slipknot
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3.14m 153-431 279 1-151, 450-616 152-152, 432-449 151 167 slipknot
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3.14m 157-437 281 1-152, 473-616 153-156, 438-472 152 144 slipknot
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3.14m 157-472 316 1-154, 476-616 155-156, 473-475 154 141 slipknot
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3.14m 157-475 319 1-154, 479-616 155-156, 476-478 154 138 slipknot
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3.14m 159-437 279 1-156, 473-616 157-158, 438-472 156 144 slipknot
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3.14m 159-472 314 1-156, 476-616 157-158, 473-475 156 141 slipknot
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3.14m 159-475 317 1-156, 479-616 157-158, 476-478 156 138 slipknot
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3.14m 160-437 278 1-158, 473-616 159-159, 438-472 158 144 slipknot
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3.14m 160-472 313 1-158, 476-616 159-159, 473-475 158 141 slipknot
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3.14m 160-475 316 1-158, 479-616 159-159, 476-478 158 138 slipknot
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3.14m 172-468 297 1-154, 524-616 155-171, 469-523 154 93 slipknot
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2.1m 232-422 191 1-151, 459-616 152-231, 423-458 151 158 slipknot
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3.1m 172-530 359 1-153, 608-616 154-171, 531-607 153 9 slipknot
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2.1m 233-437 205 1-159, 463-616 160-232, 438-462 159 154 slipknot
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2.1m 236-434 199 1-232, 463-616 233-235, 435-462 232 154 slipknot
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2.1m 247-434 188 1-235, 463-616 236-246, 435-462 235 154 slipknot
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2.1m 247-462 216 1-159, 479-616 160-246, 463-478 159 138 slipknot
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3.1m 247-478 232 1-171, 489-616 172-246, 479-488 171 128 slipknot
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2.1m 252-440 189 1-246, 479-616 247-251, 441-478 246 138 slipknot
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3.1m 252-478 227 1-246, 489-616 247-251, 479-488 246 128 slipknot
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3.1m 252-488 237 1-171, 514-616 172-251, 489-513 171 103 slipknot
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4.3 184-530 347 1-171, 591-616 172-183, 531-590 171 26 slipknot
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3.1m 244-540 297 541-616 1-171 172-243 171 75 slipknot
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3.1m 233-530 298 1-183, 541-616 184-232, 531-540 183 76 slipknot
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3.1m 236-530 295 1-232, 541-616 233-235, 531-540 232 76 slipknot
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1.1m 256-434 179 1-246, 465-616 247-255, 435-464 246 152 slipknot
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1.1m 256-464 209 1-251, 466-616 252-255, 465-465 251 151 slipknot
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1.1m 259-437 179 1-255, 465-616 256-258, 438-464 255 152 slipknot
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1.1m 259-464 206 1-251, 469-616 252-258, 465-468 251 148 slipknot
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1.1m 261-437 177 1-258, 465-616 259-260, 438-464 258 152 slipknot
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1.1m 261-464 204 1-258, 469-616 259-260, 465-468 258 148 slipknot
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1.1m 261-468 208 1-251, 473-616 252-260, 469-472 251 144 slipknot
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1.1m 262-448 187 1-260, 465-616 261-261, 449-464 260 152 slipknot
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1.1m 262-464 203 1-260, 469-616 261-261, 465-468 260 148 slipknot
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1.1m 262-468 207 1-260, 472-616 261-261, 469-471 260 145 slipknot

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling