6G7EB

Crystal structure of chaetomium thermophilum mot1 (e1434q, 1837-1886 deletion mutant)
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Genus: 464
Slipknot S -31

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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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-31 82-366 285 1-81 382-1820 367-381 81 1439 slipknot
Chain Sequence
ATRLDRLVTILETGSTRLIRDTAVNQLADWQKQHPEELFNLLSRVVPYLRHKDWETRTTAAKAIGKIIENAPLYDPN-----------------------------NFFRLESLDVATIVKYGRPLLRGGPVDYNLAALDPQKRLAHLKKTLNGRLGLLGRVFEDEEMPGAEWPFERLCEFLKVDLFDPQWETRHGAA-----------------------------------------------------------------------------------------------------------------------------------------MGLREVIRVHGAGAGRRRGKTRKENNDLNRQWLDDLAYRLLCVLMLDKFTDYSSDTSVAPIRETVGQTLGAVLRHISVESVHAIYRLLYCMVTQENMWAVCHGGMVGLRYVVAVRKDLLLQDGDMIDGVVRCVMQGLGDIDDDVRSVSAATLIPMAKEFVMMRRSALDSLINIVWESLSNLGDDLSASTGKIMDLLATLCSFPEVLEAMKVSASQDEERSFTLLVPRLYPFLRHTITSVRLAVLKALMTFANLGGETSQGW------LNGRILRLIFQNIIVERDQDTLNMSLELWTTLVRRLAARDPAILADEFEAHAEPMMQLALHPIGVPRHPIPMNPALFQKPSGGTYSTHDVDGHMIQGEVDLVGVDVLIRSRISAAKAMGLIMSFIPTPRLASYDTAVLQALSSPYASTQLAAAMVIDEYAKNCSTPEVASRFIEPLQKIIDLERPSHYRDLVTYVQRVRSASQQLINLFRDHGKVSQGKLPTLAVVVQGEPEAGPGAFSIANAEKVVNEDFERLKRLM--------------------------------------APGQRLIALPQLNEAREQTVEVIEEAKAAKEARDARIKAAAACALVAMKVLPKKPSPLIKAIMDSIKTEENQELQSRSAATIARLVQLFTESGRRGPAEKVVANLVKFSCVEVAETPEFPIHAHKTNVILSMQKEEDRVPDAVKYAREAKAARITRRGAKEALEILSKNFGAELLERVPTLRTFMEEPLVRAFSGDLPPEARDPENAFGQEIVDAMSVIRTMTPTLHPALHPFVMQQVPLVIKALRSDLSVFRYMAAKCMATICSVITVDGMTALVEKVLPSINNPLDLSFRQGAIEVIYHLIAVMGDAILPYVIFLIVPVLGRMSDSDNQIRLIATTSFATLVKLVPL--EAGIPDPPGLSEELLKGRDRERTFIAQLLDPKKIEPFKIPVAIKAELRSYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEEFARTGAPEVRKLPSLIICPPTLSGHWQQEIKTYAPFLTVTAYVGSPAERRAMKDSLDKTDIVITSYDVCRNDIDVIEKYNWNYCVLDQGHLIKNPKAKITLAVKRLTSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIANSRYSKASSKEQEAGALAIEALHKQVLPFLLRRLKEEVPKILQNYYCDLSDLQRKLFEDFTKREGKKITETAGRDDKEAKQHIFQALQYMRKLCNSPALVMKPGHKAYEDTQKYLAKHGTTLEDPIHAPKLGALRDLLVDCGIGVEDPLYTPIKPHRALIFCQMKEMLDMVQNTVLKQMLPSVSYLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLTGADTVIFVEHDWNPQKDLQAMDR-----AHQKKVVNVYRIITRGTLEEKILSLQMDTDQILDLFNLG
Whole chain analysis

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Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1


  Help Knotoid subchains data interpretation Full screen
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1m 78-366 289 1-77 379-1820 367-378 77 1442 slipknot
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling