6G9IA

Crystal structure of ebolavirus glycoprotein in complex with clomipramine
Slipknot S +31 +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 74-140 67 1-73 144-446 141-143 73 303 slipknot
Chain Sequence
SIPLGVIHNSALQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQA---------------------SGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNPEIDTEWAFWETLSFTVVXXXXXXX
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 77-138 62 1-76 146-287 139-145 76 142 slipknot
view details
1.1 81-139 59 1-76, 145-287 77-80, 140-144 76 143 slipknot
sequence length 287
structure length 251
publication title Structures of Ebola Virus Glycoprotein Complexes with Tricyclic Antidepressant and Antipsychotic Drugs.
pubmed doi rcsb
molecule tags Viral protein
molecule keywords Envelope glycoprotein,Envelope glycoprotein
source organism Ebola virus - mayinga, zaire, 1976
missing residues 159-179, 253-255, 263-274
total genus Genus: 59
ec nomenclature
pdb deposition date 2018-04-10
KnotProt deposition date 2018-09-13
Image from the rcsb pdb (www.rcsb.org)
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