| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
-31 | 187-250 | 64 | 1-186, 251-387 | 186 | 137 | knot |
Chain Sequence |
PVARYPPIVASLTAKSKAARQRRVEQWQATVHAAKSVDEKLRILTKMQFMKYVVYPQTFALNADNWYQSFTKTVFLSGLPPTPAKLEPEPTLDITALREAVCDCLLQEHFFLRRKKRAPVIQDREAIASPFLDQLVASLTGLLSVHNPVLAAAALDCKRPVHFFWLRGEEIIPRGHRKGRVDALRYQINDKPHNQIRISRQLPEFVPLDYSIPIEVPVMSCKPDKLPLFKRQYENTIFIGSKTADPLCYGHTQFHLLPDKLKREKLLKQNCADQIEVVFRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQGVITDGKYFSFFCYQLNTLALTAQADQNNPRKNICWGTQSKPLYETIEDNNVKGFNDDVLLQLVQFLLNRPKED
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1m | 185-253 | 69 | 1-165, 283-387 | 166-184, 254-282 | 165 | 105 | slipknot | |||
| view details |
|
3.1m | 185-313 | 129 | 1-165, 327-387 | 166-184, 314-326 | 165 | 61 | slipknot | |||
| view details |
 |
2.1m | 185-282 | 98 | 1-166, 293-387 | 167-184, 283-292 | 166 | 95 | slipknot | |||
| view details |
|
2.1m | 178-292 | 115 | 1-168, 294-387 | 169-177, 293-293 | 168 | 94 | slipknot | |||
| view details |
|
3.1m | 186-348 | 163 | 349-387 | 1-167 | 168-185 | 167 | 38 | slipknot |
| sequence length |
387
|
| structure length |
387
|
| publication title |
Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM.
pubmed doi rcsb |
| molecule tags |
Ribosome
|
| molecule keywords |
Mitochondrial ribosomal protein L12
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 39
|
| ec nomenclature | |
| pdb deposition date | 2018-04-13 |
| KnotProt deposition date | 2018-09-13 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
