6JIC | KnotProt

Cysteine knot

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The Resolver thinks Pdb

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Time for openFile(/static/knot_data/6jic/A/6jic_A_cysteine_knot.pdb.gz): 287 ms

reading 36 atoms

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36 atoms created

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Help Cysteine knot data interpretation Full screen

				Loop	Piercing
view details				6-c-10-b-25-c-22	16-b-32

Chain Sequence

QDDPTCGKPCNTMDDCSNGWFCQACWNSRKTCGPFV

sequence length	36
structure length	36
publication title	Identification and Characterization of a carboxypeptidase inhibitor from Lycium barbarum rcsb
molecule tags	Plant protein
molecule keywords	WCI
ec nomenclature
pdb deposition date	2019-02-20

Image from the rcsb pdb (www.rcsb.org)

1H20A 4CPAI
similar chains in the KnotProt database (40% sequence similarity)

7EQZI 8SDMI 8SDPI 8SE7G 8SE8G
similar chains in the pdb database (40% sequence similarity)

#similar chains in the KnotProt database (40% sequence similarity)
1H20 A; 4CPA I; 
#similar chains, but unknotted

#similar chains in the pdb database (40% sequence similarity)
7EQZ I; 8SDM I; 8SDP I; 8SE7 G; 8SE8 G;

6JICA

Cysteine knot

Chain Sequence