| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 211-317 | 107 | 318-794 | 1-186 | 187-210 | 186 | 476 | slipknot |
Chain Sequence |
HMKYNQYAYVETDFQQQVKELIDINFLPKNYQVWDFGSLLAKLVKNAIAEAKTDAAKNAKLAEFAVSDHQTLADFLKEKPTEIGTKQFYNVALQLLGYHVHYDYDFADPTGFMQRNALPFLQDISDNQKLISAFYRLLNTRAKNGQILLDVMAGKGYFTQFWGQNKFKFFNGKSIPVFDTNKVIREVVYVETDLDTDHDGKSDLIQVTVFRPEETNKGLKVPALYTASPYFGGIIANEKRNHNVDENLSDSTEWNDPQYVHSPIVKAEKPDGSSRPATEEAVHKSSYPLNEYMLARGFASVFAGAIGTRGSDGVRITGAPEETESAAAVIEWLHGDRVAYTDRTRTVRTTADWCNGNIGMTGRSYLGTLQIAIATTGVKGLKTVVSEAAISSWYDYYREHGSVIAPEACQGEDLDLLAETCQSNLWDAGSYLKIKPEYDKMQKQLREKEDRNTGQYSDFWEAGNYRHHADGIKCSWISVHGLNDWNVKPKNVYKIWQLVKKMPMKHHLFLHQGPHYNMNNLVSIDFTDLMNLWFVHELLGIENNAYNQWPTVMIQDNLQADKWHEEPDWSNDLGQEKIYYPTDEGELFQDGNGKAQKSFTDVGGIEFKKAGISESDWQYKFICGDEKWAKPSLRFETDEFTHPTTIVGRPEVKVRVSASLPKGEISVALVELGERQRLTATPKFLMHGGQELGYRFGTDTLQEFVPDKKTKAKLITKAHMNLQNFKDMKKPEAIDADKFYDLDFLLQPTYYTIPSGSKLALIIYSTDQGMTKRPLEDETYTIDLANTEIKFYEK
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 197-353 | 157 | 1-185, 394-794 | 186-196, 354-393 | 185 | 401 | slipknot | |||
| view details |
|
2.1 | 210-459 | 250 | 460-794 | 1-185 | 186-209 | 185 | 334 | slipknot | ||
| view details |
 |
1.1 | 199-312 | 114 | 1-186, 334-794 | 187-198, 313-333 | 186 | 461 | slipknot | |||
| view details |
|
2.1 | 209-349 | 141 | 1-186, 412-794 | 187-208, 350-411 | 186 | 383 | slipknot | |||
| view details |
|
1.1 | 200-411 | 212 | 1-186, 423-794 | 187-199, 412-422 | 186 | 372 | slipknot | |||
| view details |
|
1.1 | 199-443 | 245 | 1-186, 456-794 | 187-198, 444-455 | 186 | 339 | slipknot | |||
| view details |
|
1.1 | 208-313 | 106 | 1-187, 341-794 | 188-207, 314-340 | 187 | 454 | slipknot |
| sequence length |
794
|
| structure length |
794
|
| publication title |
Structural characterization of a prolyl aminodipeptidase (PepX) from Lactobacillus helveticus.
pubmed doi rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
Xaa-Pro dipeptidyl-peptidase
|
| source organism |
Lactobacillus helveticus
|
| total genus |
 Genus: 297
|
| ec nomenclature |
ec
3.4.14.11: Alcohol dehydrogenase. |
| pdb deposition date | 2018-12-20 |
| KnotProt deposition date | 2019-10-17 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02129 | Peptidase_S15 | X-Pro dipeptidyl-peptidase (S15 family) |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
