| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 32-224 | 193 | 225-472 | 1-18 | 19-31 | 18 | 247 | slipknot | ||
| view details |
 |
41 | 14-262 | 249 | 1-13 | 323-472 | 263-322 | 13 | 150 | slipknot |
Chain Sequence |
KFGWIKGVLVRCMLNIWGVMLFIRMTWIVGQAGIAYSCIIVIMATVVTTITGCSTSAIATNGFVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVVELLMDSGLLMIDQTNDIRVIGTITVILLLGISVAGMEWEAKAQIFLLVILITAIFNYFIGSFIAVDSKKKFGFFSYDAGILAENFGPDFRGQTFFSVFSIFFPAATGILAGANISGDLADPQMAIPKGTLLAILITGLVYVGVAISAGACIVRDATGIESNFTLISNCTDAACKYGYDFSSCRPTVEGEVSSCKFGLHNDFQVMSVVSGFSPLISAGIFSATLSSALASLVSAPKVFQALCKDNIYPGIAIFGKGYGKNNEPLRGYFLTFGIALAFILIAELNVIAPIISNFFLASYALINFSVFHASLANSPGWRPSFKYYNMWASLAGAILCCVVMFIINWWAALLTNVIVLSLYIYVSYK
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 8-254 | 247 | 1-7 | 262-472 | 255-261 | 7 | 211 | slipknot | ||
| view details |
 |
4.1 | 9-261 | 253 | 1-8 | 304-472 | 262-303 | 8 | 169 | slipknot | ||
| view details |
|
3.2 | 17-307 | 291 | 1-16 | 332-472 | 308-331 | 16 | 141 | slipknot | ||
| view details |
 |
1.1 | 35-240 | 206 | 1-13, 260-472 | 14-34, 241-259 | 13 | 213 | slipknot | |||
| view details |
 |
2.1 | 35-214 | 180 | 1-14, 239-472 | 15-34, 215-238 | 14 | 234 | slipknot | |||
| view details |
|
2.1 | 35-238 | 204 | 1-14, 241-472 | 15-34, 239-240 | 14 | 232 | slipknot | |||
| view details |
|
2.1 | 34-336 | 303 | 1-14, 388-472 | 15-33, 337-387 | 14 | 85 | slipknot | |||
| view details |
|
2.1 | 35-406 | 372 | 407-472 | 1-14 | 15-34 | 14 | 65 | slipknot |
| sequence length |
472
|
| structure length |
472
|
| publication title |
Structure and mechanism of the cation-chloride cotransporter NKCC1.
pubmed doi rcsb |
| molecule tags |
Membrane protein
|
| molecule keywords |
Solute carrier family 12 (sodium/potassium/chloride transporter), member 2
|
| source organism |
Danio rerio
|
| total genus |
 Genus: 143
|
| ec nomenclature | |
| pdb deposition date | 2019-01-17 |
| KnotProt deposition date | 2019-09-06 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF03522 | SLC12 | Solute carrier family 12 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
