| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 32-225 | 194 | 1-18, 471-472 | 19-31, 226-470 | 18 | 2 | slipknot | |||
| view details |
 |
41 | 14-262 | 249 | 1-13 | 324-472 | 263-323 | 13 | 149 | slipknot |
Chain Sequence |
KFGWIKGVLVRCMLNIWGVMLFIRMTWIVGQAGIAYSCIIVIMATVVTTITGCSTSAIATNGFVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVVELLMDSGLLMIDQTNDIRVIGTITVILLLGISVAGMEWEAKAQIFLLVILITAIFNYFIGSFIAVDSKKKFGFFSYDAGILAENFGPDFRGQTFFSVFSIFFPAATGILAGANISGDLADPQMAIPKGTLLAILITGLVYVGVAISAGACIVRDATGIESNFTLISNCTDAACKYGYDFSSCRPTVEGEVSSCKFGLHNDFQVMSVVSGFSPLISAGIFSATLSSALASLVSAPKVFQALCKDNIYPGIAIFGKGYGKNNEPLRGYFLTFGIALAFILIAELNVIAPIISNFFLASYALINFSVFHASLANSPGWRPSFKYYNMWASLAGAILCCVVMFIINWWAALLTNVIVLSLYIYVSYK
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 8-254 | 247 | 1-7 | 263-472 | 255-262 | 7 | 210 | slipknot | ||
| view details |
 |
4.1 | 8-262 | 255 | 1-7 | 306-472 | 263-305 | 7 | 167 | slipknot | ||
| view details |
|
3.2 | 16-308 | 293 | 1-15 | 330-472 | 309-329 | 15 | 143 | slipknot | ||
| view details |
 |
2.1 | 35-215 | 181 | 1-14, 243-472 | 15-34, 216-242 | 14 | 230 | slipknot | |||
| view details |
 |
1.1 | 35-242 | 208 | 1-14, 258-472 | 15-34, 243-257 | 14 | 215 | slipknot | |||
| view details |
|
2.1 | 35-337 | 303 | 1-14, 389-472 | 15-34, 338-388 | 14 | 84 | slipknot | |||
| view details |
|
2.1 | 35-406 | 372 | 407-472 | 1-14 | 15-34 | 14 | 65 | slipknot | ||
| view details |
|
1.1 | 29-212 | 184 | 1-19, 216-472 | 20-28, 213-215 | 19 | 257 | slipknot | |||
| view details |
|
1.1 | 31-212 | 182 | 1-28, 216-472 | 29-30, 213-215 | 28 | 257 | slipknot |
| sequence length |
472
|
| structure length |
472
|
| publication title |
Structure and mechanism of the cation-chloride cotransporter NKCC1.
pubmed doi rcsb |
| molecule tags |
Membrane protein
|
| molecule keywords |
Solute carrier family 12 (sodium/potassium/chloride transporter), member 2
|
| source organism |
Danio rerio
|
| total genus |
 Genus: 141
|
| ec nomenclature | |
| pdb deposition date | 2019-01-17 |
| KnotProt deposition date | 2019-09-06 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF03522 | SLC12 | Solute carrier family 12 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
