| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 33-226 | 194 | 227-931 | 1-17 | 18-32 | 17 | 704 | slipknot | ||
| view details |
 |
41 | 14-261 | 248 | 1-13 | 325-931 | 262-324 | 13 | 607 | slipknot |
Chain Sequence |
KFGWIKGVLVRCMLNIWGVMLFIRMTWIVGQAGIAYSCIIVIMATVVTTITGCSTSAIATNGFVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVVELLMDSGLLMIDQTNDIRVIGTITVILLLGISVAGMEWEAKAQIFLLVILITAIFNYFIGSFIAVDSKKKFGFFSYDAGILAENFGPDFRGQTFFSVFSIFFPAATGILAGANISGDLADPQMAIPKGTLLAILITGLVYVGVAISAGACIVRDATGIESNFTLISNCTDAACKYGYDFSSCRPTVEGEVSSCKFGLHNDFQVMSVVSGFSPLISAGIFSATLSSALASLVSAPKVFQALCKDNIYPGIAIFGKGYGKNNEPLRGYFLTFGIALAFILIAELNVIAPIISNFFLASYALINFSVFHASLANSPGWRPSFKYYNMWASLAGAILCCVVMFIINWWAALLTNVIVLSLYIYVSYKKPDVNWGSSTQALTYHQALTHSLQLCGVADHIKTFRPQCLVMTGAPNSRPAILHLVHAFTKNVGLMLCGHVRISSRRPNFKELNSDMLRYQRWLLNNNSKAFYTCVVAEDLRQGTQYMLQAAGLGRLRPNTLVIGFKNDWRIGDIKEVETYINLIHDAFDFQYGVVILRLREGLDISH-----------------------------------------------------LNVADQRLLDSQQFQQKQGKGTVDVWWLFDDGGLTLLIPYLIANKKKWKDCKIRVFIGGKINRIDHDRRAMATLLSKFRIDFSDITVLGDINTKPKSEGLTEFAEMIEPYKLREDDMEQEAAEKLKSEEPWRITDNELELYKAKGNRQIRLNELLKEHSSTANLIVMSMPLARKGAVSSALYMAWLDTLSKDLPPILLVRGNHQSVLTFYS
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 7-254 | 248 | 1-6 | 264-914 | 255-263 | 6 | 651 | slipknot | ||
| view details |
|
3.2 | 8-267 | 260 | 1-6, 277-914 | 7-7, 268-276 | 6 | 638 | slipknot | |||
| view details |
|
3.2 | 12-308 | 297 | 1-11 | 331-914 | 309-330 | 11 | 584 | slipknot | ||
| view details |
|
3.2 | 16-266 | 251 | 1-9, 277-914 | 10-15, 267-276 | 9 | 638 | slipknot | |||
| view details |
|
3.2 | 16-276 | 261 | 1-9, 279-914 | 10-15, 277-278 | 9 | 636 | slipknot | |||
| view details |
 |
1.1 | 35-241 | 207 | 1-13, 259-914 | 14-34, 242-258 | 13 | 656 | slipknot | |||
| view details |
 |
2.1 | 35-214 | 180 | 1-14, 242-914 | 15-34, 215-241 | 14 | 673 | slipknot | |||
| view details |
|
2.1 | 34-336 | 303 | 1-14, 389-914 | 15-33, 337-388 | 14 | 526 | slipknot | |||
| view details |
|
1.1 | 30-211 | 182 | 1-19, 215-914 | 20-29, 212-214 | 19 | 700 | slipknot |
| sequence length |
914
|
| structure length |
861
|
| publication title |
Structure and mechanism of the cation-chloride cotransporter NKCC1.
pubmed doi rcsb |
| molecule tags |
Membrane protein
|
| molecule keywords |
Solute carrier family 12 (sodium/potassium/chloride transporter), member 2
|
| source organism |
Danio rerio
|
| missing residues |
651-703
|
| total genus |
 Genus: 214
|
| ec nomenclature | |
| pdb deposition date | 2019-01-17 |
| KnotProt deposition date | 2019-09-06 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF03522 | SLC12 | Solute carrier family 12 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
