| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 5-267 | 263 | 1-4 | 293-447 | 268-292 | 4 | 155 | slipknot |
Chain Sequence |
SKPNIVLIFADDAGFGDFGFQGSTQLKTPNLDKLAQSGVRFTQGYVSDSTCGPSRAGLMTGKYQQRFGYEEINVPGFMSGNSALKGADMGLPLDQKTMGDYLKEQGYKTAVFGKWHLGDADRFHPLKRGFDTFLGFRGGDRSYFNYSEQEMKNGNKHFFDKKLERDFGNYEEPKEYLTDVLGKEAAKYIEQNKDEPFFIYLAFNAVHTPLESDPKDLAKFPNLTGKRKELAAMTLGLDRASGYVLDKLKELGLDDNTIVVFSNDNGGPSDKNASNNAPLAGTKSNQLEGGIRVPFLISWPKHIKPGSTYDYPVSTLDLLPTFYSAAKGKALGSDIDGVDLLPYIQGENTARPHKVMYWKKENRAVIRDNDWKLIRYPDRPAELYDLSSDISEQTDLAAKNPERVKTMFKSLFEWELTLERPRWLLKRKYEKYDIDRMDKYRLPATQP
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 7-282 | 276 | 1-6 | 294-447 | 283-293 | 6 | 154 | slipknot | ||
| view details |
 |
2.1 | 7-293 | 287 | 1-6 | 295-447 | 294-294 | 6 | 153 | slipknot | ||
| view details |
|
2.1 | 9-282 | 274 | 1-6, 294-447 | 7-8, 283-293 | 6 | 154 | slipknot |
| sequence length |
447
|
| structure length |
447
|
| publication title |
The Carrageenan Metabolism Pathway of Marine Pseudoalteromonas Species
rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
exo-4S-kappa carrageenan S1 sulfatase
|
| source organism |
Pseudoalteromonas fuliginea
|
| total genus |
 Genus: 170
|
| ec nomenclature | |
| pdb deposition date | 2019-07-10 |
| KnotProt deposition date | 2019-10-16 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
