| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 5-263 | 259 | 1-4 | 292-447 | 264-291 | 4 | 156 | slipknot |
Chain Sequence |
SKPNIVLIFADDAGFGDFGFQGSTQLKTPNLDKLAQSGVRFTQGYVSDSTSGPSRAGLMTGKYQQRFGYEEINVPGFMSGNSALKGADMGLPLDQKTMGDYLKEQGYKTAVFGKWHLGDADRFHPLKRGFDTFLGFRGGDRSYFNYSEQEMKNGNKHFFDKKLERDFGNYEEPKEYLTDVLGKEAAKYIEQNKDEPFFIYLAFNAVHTPLESDPKDLAKFPNLTGKRKELAAMTLGLDRASGYVLDKLKELGLDDNTIVVFSNDNGGPSDKNASNNAPLAGTKSNQLEGGIRVPFLISWPKHIKPGSTYDYPVSTLDLLPTFYSAAKGKALGSDIDGVDLLPYIQGENTARPHKVMYWKKENRAVIRDNDWKLIRYPDRPAELYDLSSDISEQTDLAAKNPERVKTMFKSLFEWELTLERPRWLLKRKYEKYDIDRMDKYRLPATQP
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 5-265 | 261 | 1-4 | 291-447 | 266-290 | 4 | 157 | slipknot | ||
| view details |
|
3.1 | 7-279 | 273 | 1-6 | 293-447 | 280-292 | 6 | 155 | slipknot |
| sequence length |
447
|
| structure length |
447
|
| publication title |
The Carrageenan Metabolism Pathway of Marine Pseudoalteromonas Species
rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
exo-4S-kappa carrageenan S1 sulfatase
|
| source organism |
Pseudoalteromonas fuliginea
|
| total genus |
 Genus: 174
|
| ec nomenclature | |
| pdb deposition date | 2019-07-13 |
| KnotProt deposition date | 2019-10-16 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
