| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
41 | 16-251 | 236 | 1-15, 252-481 | 15 | 230 | knot |
Chain Sequence |
DLSQCDREPIHLLGGIQSHGVLLAFRGPDRLLEVVSANAQALLGRPPETLLGQPVGRVLPAEVLAQWEPLVARGSVRVVLPAGAYRALLHESDGLTVLELEPAELQPGMEETALEVVRRLVSPLAGVKGTQALLQTAADTVRALTGFDRVMVYRFDADWHGEVLAESKRGGMDGFLGMHFPATDIPVQARALYTRNPLRLIADARARPVPLLPPVVPALGRPLDLSNSALRSVSPVHLEYLRNMGVGASFSLSLLKEGVLWGLIACHHLEPLHISHERRRACEVLTQLLALQLSAEERAAEASEDAHRAALLGQLATAMGEGGTLEEVLEKESERVLALTGAAGVALLLGEEPLLVGCTPAQDEVEALVAWLATQPFQTSFHTDRLGTVYPPLAARADVAAGILAVRLAPAAARFAIWFRPEVARTISWAGNPRKPAEPEPGHQRLHPRGSFQAWEETVRDTSLPWKRADLGAAEGFRGAL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 15-287 | 273 | 1-14, 288-481 | 14 | 194 | knot | ||||
| view details |
 |
3.2m | 14-247 | 234 | 1-13 | 257-481 | 248-256 | 13 | 225 | slipknot | ||
| view details |
|
4.1 | 8-256 | 249 | 1-7 | 262-481 | 257-261 | 7 | 220 | slipknot | ||
| view details |
|
3.2m | 14-257 | 244 | 1-13 | 269-481 | 258-268 | 13 | 213 | slipknot | ||
| view details |
|
3.2m | 10-268 | 259 | 1-2, 270-481 | 3-9, 269-269 | 2 | 212 | slipknot | |||
| view details |
|
3.2m | 13-271 | 259 | 1-12 | 294-481 | 272-293 | 12 | 188 | slipknot |
| sequence length |
481
|
| structure length |
481
|
| publication title |
High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures.
pubmed doi rcsb |
| molecule tags |
Signaling protein
|
| molecule keywords |
Photoreceptor-histidine kinase BphP
|
| source organism |
Stigmatella aurantiaca
|
| total genus |
 Genus: 145
|
| ec nomenclature | |
| pdb deposition date | 2019-07-16 |
| KnotProt deposition date | 2019-10-17 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01590 | GAF | GAF domain |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
