| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
41 | 17-252 | 236 | 1-16, 253-481 | 16 | 229 | knot |
Chain Sequence |
DLSQCDREPIHLLGGIQSHGVLLAFRGPDRLLEVVSANAQALLGRPPETLLGQPVGRVLPAEVLAQWEPLVARGSVRVVLPAGAYRALLHESDGLTVLELEPAELQPGMEETALEVVRRLVSPLAGVKGTQALLQTAADTVRALTGFDRVMVYRFDADWHGEVLAESKRGGMDGFLGMHFPATDIPVQARALYTRNPLRLIADARARPVPLLPPVVPALGRPLDLSNSALRSVSPVHLEYLRNMGVGASFSLSLLKEGVLWGLIACTHLEPLHISHERRRACEVLTQLLALQLSAEERAAEASEDAHRAALLGQLATAMGEGGTLEEVLEKESERVLALTGAAGVALLLGEEPLLVGCTPAQDEVEALVAWLATQPFQTSFHTDRLGTVYPPLAARADVAAGILAVRLAPAAARFAIWFRPEVARTISWAGNPRKPAEPEPGHQRLHPRGSFQAWEETVRDTSLPWKRADLGAAEGFRGAL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 15-291 | 277 | 1-14, 292-481 | 14 | 190 | knot | ||||
| view details |
 |
3.2m | 13-246 | 234 | 1-12 | 256-481 | 247-255 | 12 | 226 | slipknot | ||
| view details |
|
4.1 | 10-255 | 246 | 1-9 | 261-481 | 256-260 | 9 | 221 | slipknot | ||
| view details |
|
3.2m | 14-258 | 245 | 1-13 | 270-481 | 259-269 | 13 | 212 | slipknot | ||
| view details |
|
3.2m | 14-270 | 257 | 1-13 | 292-481 | 271-291 | 13 | 190 | slipknot |
| sequence length |
481
|
| structure length |
481
|
| publication title |
High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures.
pubmed doi rcsb |
| molecule tags |
Signaling protein
|
| molecule keywords |
Photoreceptor-histidine kinase BphP
|
| source organism |
Stigmatella aurantiaca (strain dw4/3-1)
|
| total genus |
 Genus: 139
|
| ec nomenclature | |
| pdb deposition date | 2019-07-16 |
| KnotProt deposition date | 2019-10-17 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01590 | GAF | GAF domain |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
