| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 92-135 | 44 | 1-91, 136-245 | 91 | 110 | knot |
Chain Sequence |
HVFFAVITLFPEMFDAITAYGISGRAAKRDIVQVTCINPRDFAEGNYRRVDERPFGGGPGMVMMAEPLAKAINHAKQLASRAGCVHVPVVYMSPQGKTLNEQAVQQFVDYDGLIVLCGRYEGVDERLIQHYVDQEWSIGDYVLSGGELPAMVLLDSIIRRLPNV-------------DGLLDCPQYTKPDQFEGLDVPEIGHHANIEKWRFLQ---RYQRTLERRPELIEQVTLTKQQKKWLSDE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 90-137 | 48 | 1-89, 138-245 | 89 | 108 | knot | ||||
| view details |
 |
2.1 | 89-136 | 48 | 1-88 | 153-245 | 137-152 | 88 | 93 | slipknot | ||
| view details |
|
2.1 | 92-136 | 45 | 1-88, 156-245 | 89-91, 137-155 | 88 | 90 | slipknot | |||
| view details |
|
2.1 | 92-155 | 64 | 156-245 | 1-89 | 90-91 | 89 | 89 | slipknot |
| sequence length |
245
|
| structure length |
229
|
| publication title |
Crystal structure of a tRNA (guanine-N1)-methyltransferase from Acinetobacter baumannii
rcsb |
| molecule tags |
Transferase
|
| molecule keywords |
tRNA (guanine-N(1)-)-methyltransferase
|
| source organism |
Acinetobacter baumannii
|
| missing residues |
165-177, 201-203
|
| total genus |
 Genus: 64
|
| ec nomenclature |
ec
2.1.1.228: tRNA (guanine(37)-N(1))-methyltransferase. |
| pdb deposition date | 2021-05-21 |
| KnotProt deposition date | 2021-06-21 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01746 | tRNA_m1G_MT | tRNA (Guanine-1)-methyltransferase |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
