| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 198-242 | 45 | 1-197, 243-294 | 197 | 52 | knot |
Chain Sequence |
AATREFIEMWRLLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAAA------------------KNFLFLRLWDRNMDIAMGWKGAQAMQFGQPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRELVKRYQEKWDKLLLTSTEKSHVDLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFVDKSMQPGTSLAKAKRLNLATECLPLDKYLQWEIGNKNLTLDQMIRILLCLKNNGNWQEALQFVPKRKHTGFL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 198-244 | 47 | 1-197, 245-294 | 197 | 50 | knot | ||||
| view details |
 |
2.1 | 201-257 | 57 | 1-197, 283-294 | 198-200, 258-282 | 197 | 12 | slipknot | |||
| view details |
|
2.1 | 202-260 | 59 | 1-200, 269-294 | 201-201, 261-268 | 200 | 26 | slipknot |
| sequence length |
294
|
| structure length |
276
|
| publication title |
Structural basis of RNA processing by human mitochondrial RNase P.
pubmed doi rcsb |
| molecule tags |
Rna binding protein
|
| molecule keywords |
3-hydroxyacyl-CoA dehydrogenase type-2
|
| source organism |
Homo sapiens
|
| missing residues |
66-83
|
| total genus |
 Genus: 80
|
| ec nomenclature |
ec
2.1.1.218: tRNA (adenine(9)-N(1))-methyltransferase. ec 2.1.1.221: tRNA (guanine(9)-N(1))-methyltransferase. |
| pdb deposition date | 2021-05-26 |
| KnotProt deposition date | 2021-10-06 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| F | PF01746 | tRNA_m1G_MT | tRNA (Guanine-1)-methyltransferase |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
