8DKCD

P. gingivalis rna polymerase
Cysteine knot
Loop Piercing
view details
815-c-896-b-899-c-899 815-b-896
Chain Sequence
KNNFSKIRITLASPEEILENSFGEVLKPETINYRTYKPERDGLFCERIFGPVKDFECHCGKYKRIRYRGIVCDRCGVEVTEKKVRRERMGHIHLVVPVAHIWYFRSLPNKIGYLLGLPTKKLDAIIYYERYVVIQPGVAEGLSQLDLLSEEEYLDKLDEIERTHKGNQNLEDTNPDKFIAKIGAEAIYDLLCRVDLDSISYELRDRANTDGSQQRKTEALKRLQVVESFRASKGVNRPEWMVMKVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAPEVILRNEKRMLQEAVDSLFDNSRKSSAVKSDNNRPLKSLSDSLKGKQGRFRQNLLGKRVDYSARSVIVVGPELKMHECGLPKDMAAELYKPFIIRKLIERGIVKTVKSAKKIVDRKEPVIWDILEYVMKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLSCTAFNADFDGDQMAVHLPLSNEAILEAQLLMLASHNILNPANGAPITVPSQDMVLGLYYITKLRPNTKGHGLIFYGPEEATIAYNEGKVDIHAPIKVYVEDYENGELVRRMVETSVGRLMVNEYVPKKVGYVNEVLGKKALRDIIGSVIKICGVATTAKFLDDIKNLGYYMAFKGGLSFNLADVLIPDEKDQLIQEGYTAVEQIMQDYSMGFITFNERYNQIIDTWTHINGRLSNVLIKQLSSDNDGFNSVFMMMDSGARGSKEQIRQLSGMRGLMAKPQKSGAEGGQIIENPILSNFKEGLSVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVSHDVIITEEDCGTLRGLLTTELKQNEDVVASLYERILGRVSVHDIIHPTTGDIIVRAGEEIREQAAQIIEDSPIEAVEIRSVLTCESKKGVCAKCYGRNLATNRMVQRGEVVGVIAAQSIGEPGTQLTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGLPRVTELFEARNPSNPAIVSEIDGEIGFGKLKRGNREITVTSKLGEEKKYLIPLSKQLLVQENDFVRAGTPLSDGAITPADILAIKGPTAVQEYIVNEVQDVYRLQGVKINDKHFEVIVRQMMRKVEIVDPGDTLFLEQQVVDKFEVMEENDRIWGKKVVIDAGDSQVLKAGQIVTARKLRDENSMLKRKDLKIVKVRDAKSATASQILQGITRAALQTKSFMSAASFQETTKVLNEAAICGKTDYLEGLKENVICGHLIPAGTGLRDYEKLVVM
sequence length 1393
structure length 1201
publication title Cryo-EM structure of Porphyromonas gingivalis RNA polymerase
rcsb
molecule tags Transcription
molecule keywords DNA-directed RNA polymerase subunit alpha
source organism Porphyromonas gingivalis
missing residues 924-1115
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2022-07-05
Image from the rcsb pdb (www.rcsb.org)
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KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling