Slipknot

  Help Knotting data interpretation
Knot core rangeKnot core lengthKnot tails rangeSlipknot tails rangeSlipknot loops rangeN-end lengthC-end lengthType
view details
-31 263-526 264 1-258, 538-707 259-262, 527-537 258 170 slipknot
Chain Sequence
VIREIAKRFLEQATINIAEEVVREYGDHERTMISVGVHFQACCLISDEYTLEDETTPRYVLLEGLKRQEAISKQNNICSTLGLEPLRNLADIFDRKTRRFLEVGITKRESDEYYQEKFNKIGNDMDIHVFTYEGKYFSNNPNGLEDIQKTRIFTFLSFVSDELRKENMFTEMYVTEE---ELEMYKSKLFIAMRDESVPLPYINYEHLRTRCETFKRNQAECEAKVADVASRLKIKLEHLEENKLRPLEIPKEKEAPYTHKFLMKDAWFFAKPHDSERAQPQQILYDFFEAANMGFMTTSPKPIFGKQGLMYHSLWGQTKRAIKDKRNELEPSEQRDFLCGIGRASKKIQEDKWQESREEEFKQEETKGAAKRGFPTWFNEEWLWAMRDSKIG-----DWIPMAEMPPCKNEMEDYAKKMCEELESKIQGTNCAREMSKLIHTIGSLHTECRNFPGKVKIVPIYCRGTLRGESTDCLFGIAIKGKSHLNKDDGMYTVVTFEFSTEEPNPSKHEKYTVFEAGTVPVEAKEKKLFLY-----------CRTTGMSKLKNDWFSKCRRCLIPTMETVEQIVLKECALKEENRVSEMLENKRAWIAHENGENLTRLVSTKLKDLCRMLIVTQFYYCIYNDNQLEGFCNEQKKFLMFLQADKDSKSAFTFNQKGLYEKIEECIVSNPLCIFLADRLNKLFLVAKSNGAKYFE
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling