3IEO | KnotProt

Note, that the numbers in the matrix denote the consecutive residues in the loop, not the index of amino acids in the chain!

Knot K

Help Knotting data interpretation

		Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details	+ 3₁	22-255	234	1-21, 256-257			21	2	knot
view details	+ 3₁	18-254	237	255-257	1-3	4-17	3	2	slipknot
view details	+ 3₁	24-233	210	234-236	1-1	2-23	1	2	slipknot
view details	+ 3₁	15-254	240	255-257	1-2	3-14	2	2	slipknot
view details	+ 3₁	21-233	213	234-236	1-3	4-20	3	2	slipknot
view details	+ 3₁	22-231	210	1-21, 232-234			21	3	knot

	Fingerprint	Knot forming loop	Loop type
knots details	K +3₁	His4 ... Asn62 <-> Bridging ionHg264 <-> His64 ... Chain closurePhe260 <-> His4	probabilistic	color sequence
knots details	K +3₁	His4 ... His94 <-> Bridging ionZn262 <-> His96 ... Chain closurePhe260 <-> His4	probabilistic	color sequence
knots details	K +3₁	His4 ... His96 <-> Bridging ionZn262 <-> His119 ... Chain closurePhe260 <-> His4	probabilistic	color sequence
knots details	K +3₁	His4 ... Asn62 <-> Bridging ionHg264 <-> His64 ... His94 <-> Bridging ionZn262 <-> His96 ... Chain closurePhe260 <-> His4	probabilistic	color sequence
knots details	K +3₁	His4 ... Asn62 <-> Bridging ionHg264 <-> His64 ... His96 <-> Bridging ionZn262 <-> His119 ... Chain closurePhe260 <-> His4	probabilistic	color sequence
knots details	K +3₁	His4 ... Asn62 <-> Bridging ionHg264 <-> His64 ... His94 <-> Bridging ionZn262 <-> His119 ... Chain closurePhe260 <-> His4	probabilistic	color sequence

Chain Sequence

HWGYGKHNGPEHWHKDFPIAKGERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNGHAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHWNTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTNFDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVDNWRPAQPLKNRQIKASF

How to cite

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling