Note, that the numbers in the matrix denote the consecutive residues in the loop, not the index of amino acids in the chain!
Knot K
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
- 31 73-118 46 1-72, 119-137 72 19 knot
Fingerprint Knot forming loop Loop type
K -31 Arg31 ... His103 <->
Bridging ionCu702
<-> His501 ... His494 <->
Bridging ionCu706
<-> Glu110 ... His143 <->
Bridging ionCu703
<-> His448 ... His443 <->
Bridging ionCu701
<-> His505 ...
Chain closureVal516 <-> Arg31
probabilistic
K -31
Chain closureArg31 <-> Val516
... His505 <->
Bridging ionCu701
<-> His443 ... His448 <->
Bridging ionCu703
<-> His143 ... Asp132 <->
Bridging ionCu704
<-> His488 ... His501 <->
Bridging ionCu702
<-> His103 ... Arg31
probabilistic
Chain Sequence
RPTLPIPDLLTTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMKMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLME-----------------------------GGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling