| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 84-215 | 132 | 1-83, 216-237 | 83 | 22 | knot |
Chain Sequence |
AYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAI
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 82-215 | 134 | 1-81, 216-237 | 81 | 22 | knot | ||||
| view details |
|
3.1 | 41-215 | 175 | 1-40 | 221-237 | 216-220 | 40 | 17 | slipknot | ||
| view details |
|
3.1 | 83-217 | 135 | 1-81, 237-237 | 82-82, 218-236 | 81 | 1 | slipknot |
| sequence length |
237
|
| structure length |
237
|
| publication title |
Comprehensive molecular structure of the eukaryotic ribosome.
pubmed doi rcsb |
| molecule tags |
Ribosome
|
| molecule keywords |
18S rRNA
|
| total genus |
 Genus: 43
|
| ec nomenclature | |
| pdb deposition date | 2009-09-22 |
| KnotProt deposition date | 2018-09-28 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
