5AFUN

Cryo-em structure of dynein tail-dynactin-bicd2n complex
Slipknot S -82 -52 -31 -31 -31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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-31 585-285 -299 1-584, 286-818 584 532 slipknot
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51 140-418 279 1-139 770-818 419-769 139 49 slipknot
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82 142-664 523 1-46, 784-818 47-141, 665-783 46 35 slipknot
Chain Sequence
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Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1m 46-276 231 1-45 352-616 277-351 45 265 slipknot
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3.1m 46-351 306 1-45 354-616 352-353 45 263 slipknot
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5.1m 46-378 333 1-45 424-616 379-423 45 193 slipknot
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5.1m 43-423 381 1-42 427-616 424-426 42 190 slipknot
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5.1m 48-530 483 1-47 590-616 531-589 47 27 slipknot
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2.1m 70-272 203 1-34, 346-616 35-69, 273-345 34 271 slipknot
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2.1m 70-345 276 1-45, 347-616 46-69, 346-346 45 270 slipknot
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1.1m 70-250 181 1-35, 273-616 36-69, 251-272 35 344 slipknot
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4.3 76-381 306 1-42, 427-616 43-75, 382-426 42 190 slipknot
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2.1m 72-289 218 1-69, 338-616 70-71, 290-337 69 279 slipknot
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3.14m 73-343 271 1-38, 382-616 39-72, 344-381 38 235 slipknot
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3.14m 74-352 279 1-72, 382-616 73-73, 353-381 72 235 slipknot
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3.1m 100-382 283 1-75, 424-616 76-99, 383-423 75 193 slipknot
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3.1m 100-423 324 1-68, 429-616 69-99, 424-428 68 188 slipknot
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3.1m 100-428 329 1-68, 433-616 69-99, 429-432 68 184 slipknot
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3.1m 100-432 333 1-76, 434-616 77-99, 433-433 76 183 slipknot
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3.1m 100-433 334 1-77, 435-616 78-99, 434-434 77 182 slipknot
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3.1m 100-434 335 1-77, 439-616 78-99, 435-438 77 178 slipknot
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3.1m 104-382 279 1-99, 424-616 100-103, 383-423 99 193 slipknot
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3.1m 104-423 320 1-99, 429-616 100-103, 424-428 99 188 slipknot
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3.1m 104-428 325 1-99, 433-616 100-103, 429-432 99 184 slipknot
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3.1m 104-432 329 1-99, 434-616 100-103, 433-433 99 183 slipknot
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3.1m 104-433 330 1-99, 435-616 100-103, 434-434 99 182 slipknot
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3.1m 104-434 331 1-99, 439-616 100-103, 435-438 99 178 slipknot
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3.1m 104-438 335 1-80, 441-616 81-103, 439-440 80 176 slipknot
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3.1m 107-382 276 1-103, 424-616 104-106, 383-423 103 193 slipknot
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3.1m 107-423 317 1-103, 429-616 104-106, 424-428 103 188 slipknot
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3.1m 107-428 322 1-103, 433-616 104-106, 429-432 103 184 slipknot
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3.1m 107-432 326 1-103, 434-616 104-106, 433-433 103 183 slipknot
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3.1m 107-433 327 1-103, 435-616 104-106, 434-434 103 182 slipknot
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3.1m 107-434 328 1-103, 439-616 104-106, 435-438 103 178 slipknot
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3.1m 107-438 332 1-103, 441-616 104-106, 439-440 103 176 slipknot
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2.1m 110-345 236 1-73, 387-616 74-109, 346-386 73 230 slipknot
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2.1m 110-386 277 1-106, 390-616 107-109, 387-389 106 227 slipknot
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3.1m 110-389 280 1-106, 424-616 107-109, 390-423 106 193 slipknot
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3.1m 110-423 314 1-106, 429-616 107-109, 424-428 106 188 slipknot
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3.1m 110-428 319 1-106, 433-616 107-109, 429-432 106 184 slipknot
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3.1m 110-432 323 1-106, 434-616 107-109, 433-433 106 183 slipknot
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3.1m 110-433 324 1-106, 435-616 107-109, 434-434 106 182 slipknot
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3.1m 110-434 325 1-106, 439-616 107-109, 435-438 106 178 slipknot
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3.1m 110-438 329 1-106, 441-616 107-109, 439-440 106 176 slipknot
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2.1m 111-349 239 1-109, 387-616 110-110, 350-386 109 230 slipknot
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2.1m 111-387 277 1-109, 390-616 110-110, 388-389 109 227 slipknot
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2.1m 111-389 279 1-109, 394-616 110-110, 390-393 109 223 slipknot
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2.1m 111-393 283 1-109, 397-616 110-110, 394-396 109 220 slipknot
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2.1m 111-396 286 1-109, 402-616 110-110, 397-401 109 215 slipknot
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2.1m 111-401 291 1-109, 408-616 110-110, 402-407 109 209 slipknot
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2.1m 111-407 297 1-109, 411-616 110-110, 408-410 109 206 slipknot
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2.1m 111-410 300 1-109, 413-616 110-110, 411-412 109 204 slipknot
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8.20m 104-530 427 1-80, 588-616 81-103, 531-587 80 29 slipknot
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3.1m 111-412 302 1-109, 422-616 110-110, 413-421 109 195 slipknot
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3.1m 111-421 311 1-109, 429-616 110-110, 422-428 109 188 slipknot
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4.3 103-471 369 1-83, 499-616 84-102, 472-498 83 118 slipknot
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5.1m 103-498 396 1-84, 500-616 85-102, 499-499 84 117 slipknot
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1.1m 145-350 206 1-110, 402-616 111-144, 351-401 110 215 slipknot
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3.1m 145-401 257 1-110, 408-616 111-144, 402-407 110 209 slipknot
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2.1m 145-407 263 1-110, 411-616 111-144, 408-410 110 206 slipknot
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2.1m 145-410 266 1-110, 413-616 111-144, 411-412 110 204 slipknot
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2.1m 145-412 268 1-110, 422-616 111-144, 413-421 110 195 slipknot
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2.1m 145-421 277 1-110, 429-616 111-144, 422-428 110 188 slipknot
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2.1m 145-428 284 1-109, 434-616 110-144, 429-433 109 183 slipknot
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2.1m 145-433 289 1-109, 435-616 110-144, 434-434 109 182 slipknot
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2.1m 145-434 290 1-109, 441-616 110-144, 435-440 109 176 slipknot
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2.1m 145-440 296 1-96, 445-616 97-144, 441-444 96 172 slipknot
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1.1m 149-351 203 1-144, 402-616 145-148, 352-401 144 215 slipknot
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1.1m 149-401 253 1-144, 408-616 145-148, 402-407 144 209 slipknot
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2.1m 149-407 259 1-144, 422-616 145-148, 408-421 144 195 slipknot
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2.1m 149-421 273 1-144, 429-616 145-148, 422-428 144 188 slipknot
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2.1m 149-428 280 1-144, 434-616 145-148, 429-433 144 183 slipknot
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2.1m 149-433 285 1-144, 435-616 145-148, 434-434 144 182 slipknot
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2.1m 149-434 286 1-144, 441-616 145-148, 435-440 144 176 slipknot
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2.1m 149-440 292 1-144, 445-616 145-148, 441-444 144 172 slipknot
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1.1m 152-352 201 1-148, 408-616 149-151, 353-407 148 209 slipknot
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2.1m 152-407 256 1-148, 411-616 149-151, 408-410 148 206 slipknot
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2.1m 152-410 259 1-148, 413-616 149-151, 411-412 148 204 slipknot
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2.1m 152-412 261 1-148, 422-616 149-151, 413-421 148 195 slipknot
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4.3 152-447 296 1-102, 531-616 103-151, 448-530 102 86 slipknot
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3.14m 142-444 303 1-105, 448-616 106-141, 445-447 105 169 slipknot
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4.3 155-447 293 1-151, 531-616 152-154, 448-530 151 86 slipknot
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1.1m 148-349 202 1-110, 351-616 111-147, 350-350 110 266 slipknot
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3.14m 145-444 300 1-141, 448-616 142-144, 445-447 141 169 slipknot
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2.1m 156-388 233 1-148, 429-616 149-155, 389-428 148 188 slipknot
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2.1m 156-428 273 1-148, 434-616 149-155, 429-433 148 183 slipknot
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2.1m 156-433 278 1-148, 441-616 149-155, 434-440 148 176 slipknot
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2.1m 156-440 285 1-148, 445-616 149-155, 441-444 148 172 slipknot
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2.1m 156-444 289 1-144, 451-616 145-155, 445-450 144 166 slipknot
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2.1m 156-450 295 1-154, 453-616 155-155, 451-452 154 164 slipknot
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2.1m 156-452 297 1-154, 455-616 155-155, 453-454 154 162 slipknot
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1.1m 152-349 198 1-149, 352-616 150-151, 350-351 149 265 slipknot
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3.14m 156-454 299 1-154, 462-616 155-155, 455-461 154 155 slipknot
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3.14m 156-461 306 1-154, 473-616 155-155, 462-472 154 144 slipknot
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3.14m 156-472 317 1-154, 476-616 155-155, 473-475 154 141 slipknot
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3.14m 156-475 320 1-154, 479-616 155-155, 476-478 154 138 slipknot
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3.14m 157-437 281 1-155, 473-616 156-156, 438-472 155 144 slipknot
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3.14m 157-472 316 1-155, 476-616 156-156, 473-475 155 141 slipknot
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3.14m 157-475 319 1-155, 479-616 156-156, 476-478 155 138 slipknot
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3.14m 159-437 279 1-156, 473-616 157-158, 438-472 156 144 slipknot
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3.14m 159-472 314 1-156, 476-616 157-158, 473-475 156 141 slipknot
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3.14m 159-475 317 1-156, 479-616 157-158, 476-478 156 138 slipknot
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3.14m 159-478 320 1-156, 480-616 157-158, 479-479 156 137 slipknot
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3.1m 172-471 300 1-154, 522-616 155-171, 472-521 154 95 slipknot
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3.1m 172-521 350 1-154, 525-616 155-171, 522-524 154 92 slipknot
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3.1m 172-467 296 1-158, 472-616 159-171, 468-471 158 145 slipknot
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3.1m 172-530 359 1-152, 601-616 153-171, 531-600 152 16 slipknot
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3.1m 249-459 211 1-158, 528-616 159-248, 460-527 158 89 slipknot
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2.1m 250-448 199 1-163, 480-616 164-249, 449-479 163 137 slipknot
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3.1m 250-479 230 1-248, 528-616 249-249, 480-527 248 89 slipknot
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2.1m 249-527 279 1-165, 534-616 166-248, 528-533 165 83 slipknot
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4.3 203-585 383 1-172, 599-616 173-202, 586-598 172 18 slipknot
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3.1m 244-534 291 1-173, 601-616 174-243, 535-600 173 16 slipknot
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3.1m 244-600 357 601-616 1-173 174-243 173 15 slipknot
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3.1m 252-459 208 1-249, 528-616 250-251, 460-527 249 89 slipknot
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3.1m 229-533 305 1-176, 535-616 177-228, 534-534 176 82 slipknot
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3.1m 246-534 289 1-243, 601-616 244-245, 535-600 243 16 slipknot
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3.1m 246-601 356 602-616 1-243 244-245 243 14 slipknot
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3.1m 232-533 302 1-228, 535-616 229-231, 534-534 228 82 slipknot
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1.1m 258-437 180 1-237, 466-616 238-257, 438-465 237 151 slipknot
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1.1m 258-465 208 1-251, 469-616 252-257, 466-468 251 148 slipknot
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1.1m 261-441 181 1-257, 466-616 258-260, 442-465 257 151 slipknot
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1.1m 261-465 205 1-257, 469-616 258-260, 466-468 257 148 slipknot
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1.1m 263-442 180 1-260, 466-616 261-262, 443-465 260 151 slipknot
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1.1m 263-465 203 1-260, 469-616 261-262, 466-468 260 148 slipknot
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1.1m 263-468 206 1-251, 472-616 252-262, 469-471 251 145 slipknot
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1.1m 262-516 255 1-248, 531-616 249-261, 517-530 248 86 slipknot
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1.1m 263-516 254 1-261, 527-616 262-262, 517-526 261 90 slipknot
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1.1m 264-450 187 1-262, 468-616 263-263, 451-467 262 149 slipknot

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling