5H5EA

The crystal structure of the yeast arginine methyltransferase sfm1 complexed with sah
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 101-149 49 1-100, 150-219 100 70 knot
Chain Sequence
SHHHHHHLEVL-------SKYIIEHMEEGFSEWVILEYSQILREVGAENLILSSLPESTTEKDIPQRLLKLGLRWTTKDLKGINEDFKDLELLKDGRVCLLDPRATIDLQPEDATKFDYFVFGGILGDHPPRDRTKELKTAYPNLLISRRLGDKQMTTDTAIRTTQLIIKDRIAFEDIKFIDYPEFRFNKNEATEMPFRYVLDKEGKPILPEGMLDLIK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5



Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 93-142 50 1-92, 143-212 92 70 knot
view details
2.1 91-139 49 1-90 145-212 140-144 90 68 slipknot
sequence length 219
structure length 212
publication title A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
pubmed doi rcsb
molecule tags Transferase
molecule keywords Protein arginine N-methyltransferase SFM1
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
missing residues 12-18
ec nomenclature
pdb deposition date 2016-11-05
KnotProt deposition date 2017-01-23
Image from the rcsb pdb (www.rcsb.org)
5H5FA 5C74A 5H5EA 5C77A
similar chains in the KnotProt database (40% sequence similarity)
5C74B 5C77B 5H5DA
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 5H5F A;  5C74 A;  5H5E A;  5C77 A; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 5C74 B;  5C77 B;  5H5D A; 
           

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling