5H5EA

The crystal structure of the yeast arginine methyltransferase sfm1 complexed with sah
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 101-149 49 1-100, 150-219 100 70 knot
Chain Sequence
SHHHHHHLEVL-------SKYIIEHMEEGFSEWVILEYSQILREVGAENLILSSLPESTTEKDIPQRLLKLGLRWTTKDLKGINEDFKDLELLKDGRVCLLDPRATIDLQPEDATKFDYFVFGGILGDHPPRDRTKELKTAYPNLLISRRLGDKQMTTDTAIRTTQLIIKDRIAFEDIKFIDYPEFRFNKNEATEMPFRYVLDKEGKPILPEGMLDLIK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1 93-142 50 1-92, 143-212 92 70 knot
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2.1 91-139 49 1-90 145-212 140-144 90 68 slipknot
missing residues 12-18
publication title A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
pubmed doi rcsb
structure length 212
molecule tags Transferase
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
sequence length 219
molecule keywords Protein arginine N-methyltransferase SFM1
ec nomenclature
pdb deposition date 2016-11-05
KnotProt deposition date 2017-01-23
Image from the rcsb pdb (www.rcsb.org)
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