5KELA

Ebov gp in complex with variable fab domains of iggs c2g4 and c13c6
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 76-139 64 1-75 143-276 140-142 75 134 slipknot
Chain Sequence
IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILP---------------------PSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNRKIRSEELSF
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
1.1 81-138 58 1-74, 144-235 75-80, 139-143 74 92 slipknot
missing residues 156-176, 247-266
publication title Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.
pubmed doi rcsb
structure length 235
molecule tags Viral protein/immune system
source organism Zaire ebolavirus (strain mayinga-76)
sequence length 276
molecule keywords Ebola surface glycoprotein, GP1
ec nomenclature
pdb deposition date 2016-06-09
KnotProt deposition date 2016-09-07
Image from the rcsb pdb (www.rcsb.org)
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