5KEMA

Ebov sgp in complex with variable fab domains of iggs c13c6 and bdbv91
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 55-119 65 1-54 123-232 120-122 54 110 slipknot
Chain Sequence
CRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNPEIDTT
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5



Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 56-117 62 1-55 125-232 118-124 55 108 slipknot
view details
1.1 61-118 58 1-55, 124-232 56-60, 119-123 55 109 slipknot
sequence length 232
structure length 232
publication title Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.
pubmed doi rcsb
molecule tags Viral protein/immune system
molecule keywords BDBV91 variable Fab domain light chain
source organism Homo sapiens
ec nomenclature
pdb deposition date 2016-06-09
KnotProt deposition date 2016-09-07
Image from the rcsb pdb (www.rcsb.org)
5KEMA
similar chains in the KnotProt database (40% sequence similarity)
5KEMF
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 5KEM A; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 5KEM F; 
           

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