5O95A

Structure of the putative methyltransferase lpg2936 from legionella pneumophila
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 170-214 45 1-169, 215-242 169 28 knot
Chain Sequence
VRTIRIYQPGEYQPGQLLELSPEAGQHVGVVLRMEQGEQLTLFNGDNKEFTASIERVKKKQVFVRIASVLEVNRESPLKIHLAQAISKGERMEMVMQKSAELGVACITPLITERCQVKIDKEKMAKKMHQWLNIIIGACEQCGRNQIPELRQPVYLDQFVREAKEHLKLILHPAFSKTWRDYPVQPPDVALIIGPEGGFSDEEIRLTSGHGFLPLSLGPRVLRTETAAITALSVLQAAGGDL
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1 167-226 60 1-166, 227-242 166 16 knot
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3.1 167-214 48 1-166 227-242 215-226 166 16 slipknot
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3.1 168-216 49 1-166, 227-242 167-167, 217-226 166 16 slipknot
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3.1 168-228 61 1-166, 242-242 167-167, 229-241 166 1 slipknot
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3.1 169-216 48 1-167, 241-242 168-168, 217-240 167 2 slipknot
publication title Crystal structure of the Legionella pneumophila Lpg2936 in complex with the cofactor S-adenosyl-L-methionine reveals novel insights into the mechanism of RsmE family methyltransferases.
pubmed doi rcsb
structure length 242
molecule tags Transferase
source organism Legionella pneumophila
sequence length 242
molecule keywords Ribosomal RNA small subunit methyltransferase E
ec nomenclature
pdb deposition date 2017-06-15
KnotProt deposition date 2017-11-08
Image from the rcsb pdb (www.rcsb.org)
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